RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 SHANK1Q9Y566 2161 aa8.61□□□□□ -1.03
RTFDC1-208ENST00000484084 CENPEQ02224 2701 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 SPTBN1Q01082 2364 aaKnown RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 A6NCN8 305 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 TEX33O43247 280 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 HTRA2O43464 458 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 GADD45BO75293 160 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 STK17BO94768 372 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 IVLP07476 585 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 ELFN1P0C7U0 828 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 XPAP23025 273 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 KELP23276 732 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 ETV3P41162 512 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 STAT5AP42229 794 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 GNPDA1P46926 289 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 GSCP56915 257 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 RAB15P59190 212 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 BPIFB4P59827 614 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 OGDHQ02218 1023 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 NSUN2Q08J23 767 aaKnown RBP eCLIP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 ABHD18Q0P651 414 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 IHHQ14623 411 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 GRM3Q14832 879 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 PPP1R15BQ5SWA1 713 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 TCTN3Q6NUS6 607 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 WDR59Q6PJI9 974 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 WDR74Q6RFH5 385 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 CYP4V2Q6ZWL3 525 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 TECPR1Q7Z6L1 1165 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 SLFN11Q7Z7L1 901 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 PGBD5Q8N414 524 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 SFRP1Q8N474 314 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 ARFGAP1Q8N6T3 406 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 NPWQ8N729 165 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 RNF31Q96EP0 1072 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 CELF6Q96J87 481 aaKnown RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 SMIM14Q96QK8 99 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 GSDMCQ9BYG8 508 aa8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 SUDS3Q9H7L9 328 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 AKAP7Q9P0M2 348 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 UBA2Q9UBT2 640 aaPredicted RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 TNRC6AQ8NDV7 1962 aaKnown RBP8.6□□□□□ -1.03
RTFDC1-208ENST00000484084 OTOGQ6ZRI0 2925 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 TRBV23OR9-2A0A075B6M9 112 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 WIPF3A6NGB9 483 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 A8MU76 341 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 EPHB6O15197 1021 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 CCP110O43303 1012 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 HEXIM1O94992 359 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 CLDN1O95832 211 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 UCHL3P15374 230 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 POU3F2P20265 443 aaPredicted RBP8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 COL8A1P27658 744 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 TEAD1P28347 426 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 CSTF2P33240 577 aaKnown RBP eCLIP8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 PAPOLAP51003 745 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 RPL7AP62424 266 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 GPLD1P80108 840 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 CDR2Q01850 454 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 ILF3Q12906 894 aaKnown RBP eCLIP8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 LAMB3Q13751 1172 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 RAPGEF1Q13905 1077 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 ACOX1Q15067 660 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 CA9Q16790 459 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 TSR1Q2NL82 804 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 VWA3BQ502W6 1294 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 PYCR3Q53H96 274 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 Q6ZVL8 140 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 TSPAN33Q86UF1 283 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 FAM129CQ86XR2 697 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 SLC37A2Q8TED4 501 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 FNIP1Q8TF40 1166 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 NUS1Q96E22 293 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 DTD2Q96FN9 168 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 TEFMQ96QE5 360 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 AGAP2Q99490 1192 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 NCAPGQ9BPX3 1015 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 C11orf70Q9BRQ4 267 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 TRIM55Q9BYV6 548 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 GANQ9H2C0 597 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 NDST4Q9H3R1 872 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 MLXIPLQ9NP71 852 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 OGFRQ9NZT2 677 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 HOOK1Q9UJC3 728 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 MOSPD1Q9UJG1 213 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 TLK1Q9UKI8 766 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 TMEM98Q9Y2Y6 226 aa8.59□□□□□ -1.03
RTFDC1-208ENST00000484084 FBN2P35556 2912 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 PCSK5Q92824 1860 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 NPIPB15A6NHN6 443 aaPredicted RBP8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 CREB3O43889 395 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 DNAJB5O75953 348 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 SORBS2O94875 1100 aaKnown RBP8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 KRT3P12035 628 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 GPD1P21695 349 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 SERPINA4P29622 427 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 KLK7P49862 253 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 NDST2P52849 883 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 JAM2P57087 298 aa8.58□□□□□ -1.04
RTFDC1-208ENST00000484084 DPTQ07507 201 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms