RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ITPR2Q14571 2701 aa12.87□□□□□ -0.35
UBR4-213ENST00000483922 MYO9AB2RTY4 2548 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 ZNF891A8MT65 544 aaPredicted RBP12.86□□□□□ -0.35
UBR4-213ENST00000483922 B4E171 279 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 SOD1P00441 154 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 LHCGRP22888 699 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 SERPINA4P29622 427 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 ETV3P41162 512 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 TSPAN7P41732 249 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 CD97P48960 835 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 ZNF143P52747 638 aaPredicted RBP12.86□□□□□ -0.35
UBR4-213ENST00000483922 NDST2P52849 883 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 MLLT10P55197 1068 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 CDK3Q00526 305 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 BCL2L1Q07817 233 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 PHF13Q86YI8 300 aaPredicted RBP12.86□□□□□ -0.35
UBR4-213ENST00000483922 PGBD5Q8N414 524 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 FAM26EQ8N5C1 309 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 NPWQ8N729 165 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 MLKLQ8NB16 471 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 RNF31Q96EP0 1072 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 GSDMCQ9BYG8 508 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 ATP13A3Q9H7F0 1226 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 ADAM22Q9P0K1 906 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 TMEM98Q9Y2Y6 226 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 PCDHGC4Q9Y5F7 938 aa12.86□□□□□ -0.35
UBR4-213ENST00000483922 MRPS18BQ9Y676 258 aaKnown RBP12.86□□□□□ -0.35
UBR4-213ENST00000483922 A8MU76 341 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 HTRA2O43464 458 aaPredicted RBP12.85□□□□□ -0.35
UBR4-213ENST00000483922 PALMO75781 387 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 HEXIM1O94992 359 aaKnown RBP12.85□□□□□ -0.35
UBR4-213ENST00000483922 PEX11BO96011 259 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 FURINP09958 794 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBR4-213ENST00000483922 SCNN1BP51168 640 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 MC2RQ01718 297 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 SLC10A7Q0GE19 358 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 CDC20Q12834 499 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 ILF3Q12906 894 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBR4-213ENST00000483922 CLEC16AQ2KHT3 1053 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 TSR1Q2NL82 804 aaKnown RBP12.85□□□□□ -0.35
UBR4-213ENST00000483922 DEFB109BQ30KR1 87 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.85□□□□□ -0.35
UBR4-213ENST00000483922 DCAF12Q5T6F0 453 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 Q6ZVL8 140 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 CYP4V2Q6ZWL3 525 aaPredicted RBP12.85□□□□□ -0.35
UBR4-213ENST00000483922 MON1BQ7L1V2 547 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 TECPR1Q7Z6L1 1165 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 TSPAN33Q86UF1 283 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 FAM129CQ86XR2 697 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 C3orf20Q8ND61 904 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 FNIP1Q8TF40 1166 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 NUS1Q96E22 293 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 CATSPER2Q96P56 530 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 SELENOOQ9BVL4 669 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 ASPSCR1Q9BZE9 553 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 CATSPERBQ9H7T0 1116 aa12.85□□□□□ -0.35
UBR4-213ENST00000483922 CELSR2Q9HCU4 2923 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 PRR19A6NJB7 356 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 RNF224P0DH78 156 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 MAP4P27816 1152 aaKnown RBP12.84□□□□□ -0.35
UBR4-213ENST00000483922 SOX5P35711 763 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 POLR2LP62875 67 aaKnown RBP12.84□□□□□ -0.35
UBR4-213ENST00000483922 IHHQ14623 411 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 SNAP47Q5SQN1 464 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 CFAP58Q5T655 872 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 DENND2CQ68D51 928 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 NRSN1Q8IZ57 195 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 NLGN4XQ8N0W4 816 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 NLGN4YQ8NFZ3 816 aaPredicted RBP12.84□□□□□ -0.35
UBR4-213ENST00000483922 SLC37A2Q8TED4 501 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 DTD2Q96FN9 168 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 PEBP4Q96S96 227 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 AGAP2Q99490 1192 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 VPS16Q9H269 839 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 GPN2Q9H9Y4 310 aaPredicted RBP12.84□□□□□ -0.35
UBR4-213ENST00000483922 NLRC4Q9NPP4 1024 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 PHPT1Q9NRX4 125 aaPredicted RBP12.84□□□□□ -0.35
UBR4-213ENST00000483922 KCNK4Q9NYG8 393 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 TP53TG5Q9Y2B4 290 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 TMEM184BQ9Y519 407 aaPredicted RBP12.84□□□□□ -0.35
UBR4-213ENST00000483922 CSMD1Q96PZ7 3565 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 CENPEQ02224 2701 aa12.84□□□□□ -0.35
UBR4-213ENST00000483922 NPIPB15A6NHN6 443 aaPredicted RBP12.83□□□□□ -0.36
UBR4-213ENST00000483922 PDE2AO00408 941 aaPredicted RBP12.83□□□□□ -0.36
UBR4-213ENST00000483922 CAPN5O15484 640 aaPredicted RBP12.83□□□□□ -0.36
UBR4-213ENST00000483922 FGF10O15520 208 aaPredicted RBP12.83□□□□□ -0.36
UBR4-213ENST00000483922 DLGAP3O95886 979 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 PDGFAP04085 211 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 IVLP07476 585 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 ZNF28P17035 718 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 ERCC2P18074 760 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 VIPR1P32241 457 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 ACTR1BP42025 376 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 UQCRFS1P47985 274 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 FASLGP48023 281 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 TPI1P60174 286 aa12.83□□□□□ -0.36
UBR4-213ENST00000483922 ACTR1AP61163 376 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms