RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 CCNI2Q6ZMN8 369 aaPredicted RBP4.12□□□□□ -1.75
COMMD3-213ENST00000483684 QSOX2Q6ZRP7 698 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 TUBA1AQ71U36 451 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 TAOK1Q7L7X3 1001 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 SATL1Q86VE3 508 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 NAGSQ8N159 534 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 CADM4Q8NFZ8 388 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 NFKBIDQ8NI38 313 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 SECTM1Q8WVN6 248 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 TMEM19Q96HH6 336 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 TUBA1CQ9BQE3 449 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 NDST4Q9H3R1 872 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 LRRC4Q9HBW1 653 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 CAMK2AQ9UQM7 478 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 NAALADL1Q9UQQ1 740 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 VDAC3Q9Y277 283 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 PCDHAC2Q9Y5I4 1007 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 PSAT1Q9Y617 370 aa4.12□□□□□ -1.75
COMMD3-213ENST00000483684 IGHV4OR15-8A0A075B7B6 117 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 A0A0G2JPF8 293 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 A6NLC8 198 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 HNRNPCL3B7ZW38 293 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 USP17L23D6RBM5 183 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 ZNF587BE7ETH6 402 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 HNRNPCL1O60812 293 aaKnown RBP4.11□□□□□ -1.75
COMMD3-213ENST00000483684 TIPRLO75663 272 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 HNRNPCL4P0DMR1 293 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 DDIT3P35638 169 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 CPOXP36551 454 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 CTCFP49711 727 aaPredicted RBP4.11□□□□□ -1.75
COMMD3-213ENST00000483684 METAP2P50579 478 aaKnown RBP eCLIP4.11□□□□□ -1.75
COMMD3-213ENST00000483684 ARL16Q0P5N6 197 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 FOXD4Q12950 439 aaPredicted RBP4.11□□□□□ -1.75
COMMD3-213ENST00000483684 NAE1Q13564 534 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 ALG11Q2TAA5 492 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 COL28A1Q2UY09 1125 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 FAM122CQ6P4D5 195 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 KRBA2Q6ZNG9 492 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 HAPLN4Q86UW8 402 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 EXOC3L1Q86VI1 746 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 SFR1Q86XK3 245 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 CHERPQ8IWX8 916 aaKnown RBP4.11□□□□□ -1.75
COMMD3-213ENST00000483684 SPATA6LQ8N4H0 392 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 PPM1EQ8WY54 764 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 FIG4Q92562 907 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 EVI5LQ96CN4 794 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 RRP36Q96EU6 259 aaKnown RBP4.11□□□□□ -1.75
COMMD3-213ENST00000483684 FAM110AQ9BQ89 295 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 EIF2AK1Q9BQI3 630 aaKnown RBP4.11□□□□□ -1.75
COMMD3-213ENST00000483684 AGXT2Q9BYV1 514 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 PPP1R3EQ9H7J1 279 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 EVA1AQ9H8M9 152 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 UBTD1Q9HAC8 227 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 EBF2Q9HAK2 575 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 BRF2Q9HAW0 419 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 HINT3Q9NQE9 182 aaKnown RBP4.11□□□□□ -1.75
COMMD3-213ENST00000483684 PCDHB16Q9NRJ7 776 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 ADAM18Q9Y3Q7 739 aa4.11□□□□□ -1.75
COMMD3-213ENST00000483684 TTC36A6NLP5 189 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 LRRC53A6NM62 1247 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 AGR2O95994 175 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 DGKAP23743 735 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 CDAP32320 146 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 ARL1P40616 181 aaPredicted RBP4.1□□□□□ -1.75
COMMD3-213ENST00000483684 HARS2P49590 506 aaKnown RBP4.1□□□□□ -1.75
COMMD3-213ENST00000483684 RAD23BP54727 409 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
COMMD3-213ENST00000483684 FGFBP1Q14512 234 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 RGMBQ6NW40 437 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 METTL2BQ6P1Q9 378 aaKnown RBP4.1□□□□□ -1.75
COMMD3-213ENST00000483684 WDR63Q8IWG1 891 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 ODF3L1Q8IXM7 274 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 OR2AK2Q8NG84 335 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 ZUFSPQ96AP4 578 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 SAAL1Q96ER3 474 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 METTL2AQ96IZ6 378 aaKnown RBP4.1□□□□□ -1.75
COMMD3-213ENST00000483684 SLC41A2Q96JW4 573 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 PGLYRP2Q96PD5 576 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 USP44Q9H0E7 712 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 MMP25Q9NPA2 562 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 SLC6A13Q9NSD5 602 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 ERVK-11Q9UQG0 969 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 AAR2Q9Y312 384 aaKnown RBP4.1□□□□□ -1.75
COMMD3-213ENST00000483684 CEPT1Q9Y6K0 416 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 UTYO14607 1347 aa4.1□□□□□ -1.75
COMMD3-213ENST00000483684 LMX1BO60663 402 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 FTCDO95954 541 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 HOXB5P09067 269 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 AMD1P17707 334 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 DDX5P17844 614 aaKnown RBP4.09□□□□□ -1.75
COMMD3-213ENST00000483684 ANOS1P23352 680 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 EPHA8P29322 1005 aaPredicted RBP4.09□□□□□ -1.75
COMMD3-213ENST00000483684 CLCNKAP51800 687 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 ZNF132P52740 706 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 HNRNPH2P55795 449 aaKnown RBP4.09□□□□□ -1.75
COMMD3-213ENST00000483684 SLC20A2Q08357 652 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 GSTA3Q16772 222 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 GGNBP1Q5YKI7 109 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 PLEKHA7Q6IQ23 1121 aa4.09□□□□□ -1.75
COMMD3-213ENST00000483684 ACAD10Q6JQN1 1059 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms