RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 GANQ9H2C0 597 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 NLRC4Q9NPP4 1024 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 PHPT1Q9NRX4 125 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 SAMSN1Q9NSI8 373 aaKnown RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 GPATCH2LQ9NWQ4 482 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 TRNAU1APQ9NX07 287 aaKnown RBP7.38□□□□□ -1.23
CSDE1-206ENST00000483030 TAB2Q9NYJ8 693 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 DONSONQ9NYP3 566 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 TMEM9Q9P0T7 183 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 B4GALT6Q9UBX8 382 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 ANAPC2Q9UJX6 822 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 SUFUQ9UMX1 484 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 PLEKHM1Q9Y4G2 1056 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 ST14Q9Y5Y6 855 aa7.38□□□□□ -1.23
CSDE1-206ENST00000483030 UNC13CQ8NB66 2214 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 DOCK4Q8N1I0 1966 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 TCRBV5S1A1TA0A578 114 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CLEC18AA5D8T8 446 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 ANKRD62A6NC57 917 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 GOLGA6CA6NDK9 693 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 GOLGA6BA6NDN3 693 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 EFCAB7A8K855 629 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 A8MU76 341 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 B4E171 279 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 DFFAO00273 331 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 EEF2KO00418 725 aaKnown RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 TRAFD1O14545 582 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 EPHB6O15197 1021 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CAPN5O15484 640 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 DUX1O43812 170 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CALB1P05937 261 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 GOLGA6DP0CG33 693 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 THRAP10827 490 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CSF2RBP32927 897 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 ETV3P41162 512 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 TSPAN7P41732 249 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 ACTR1BP42025 376 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 AIF1P55008 147 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 ACTR1AP61163 376 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CDK3Q00526 305 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 BECN1Q14457 450 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CNGA3Q16281 694 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CA9Q16790 459 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 DEFB109BQ30KR1 87 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 DPCR1Q3MIW9 517 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 TCP11X2Q5H9J9 407 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 SNAP47Q5SQN1 464 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 DNAJC24Q6P3W2 148 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 TMEM71Q6P5X7 295 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CLEC18BQ6UXF7 455 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 ARHGAP36Q6ZRI8 547 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 Q6ZVL8 140 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 HSD11B1LQ7Z5J1 315 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 ZNF761Q86XN6 746 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 PHF13Q86YI8 300 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 UNC5BQ8IZJ1 945 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CLEC18CQ8NCF0 446 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 C9orf43Q8TAL5 461 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 PDCD6IPQ8WUM4 868 aaKnown RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 NUS1Q96E22 293 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 ABHD17AQ96GS6 310 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 SLC45A3Q96JT2 553 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 MCEEQ96PE7 176 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 PSMG3-AS1Q96PY0 264 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CTRCQ99895 268 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 CNPY3Q9BT09 278 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 SPRY4Q9C004 299 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 VPS16Q9H269 839 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 GPN2Q9H9Y4 310 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 FAM207AQ9NSI2 230 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 SEPT11Q9NVA2 429 aaKnown RBP7.37□□□□□ -1.23
CSDE1-206ENST00000483030 GOLGA6AQ9NYA3 693 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 KCNK4Q9NYG8 393 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 PILRAQ9UKJ1 303 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 PLAAQ9Y263 795 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 MAN2B2Q9Y2E5 1009 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 PCDHGC4Q9Y5F7 938 aa7.37□□□□□ -1.23
CSDE1-206ENST00000483030 DOPEY2Q9Y3R5 2298 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 LOC101059948A0A1B0GTJ6 334 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 DAPK3O43293 454 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 HEXIM1O94992 359 aaKnown RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 IVLP07476 585 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 MAP4P27816 1152 aaKnown RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 ERCC5P28715 1186 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 VIPR1P32241 457 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 HTR7P34969 479 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 RENBPP51606 427 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 GSCP56915 257 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 JAM2P57087 298 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 RAB15P59190 212 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 AP1S1P61966 158 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 OGDHQ02218 1023 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 PEX6Q13608 980 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 RFTN1Q14699 578 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 PTPRRQ15256 657 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 C4orf17Q53FE4 359 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 DCUN1D2Q6PH85 259 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 DOK6Q6PKX4 331 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 RFLNAQ6ZTI6 216 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 MON1BQ7L1V2 547 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms