RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TSHRP16473 764 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 EPHA8P29322 1005 aaPredicted RBP20.88■□□□□ 0.93
SEC13-217ENST00000482647 ACTN2P35609 894 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 TRIM23P36406 574 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 NFATC4Q14934 902 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 INAVAQ3KP66 663 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 ZNF542PQ5EBM4 170 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 TPRG1LQ5T0D9 272 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 MACC1Q6ZN28 852 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 ZNF765Q7L2R6 523 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 LYSMD3Q7Z3D4 306 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 DGLUCYQ7Z3D6 616 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 PIP4P1Q86T03 277 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 NAXDQ8IW45 347 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 RASGEF1CQ8N431 466 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 GORASP1Q9BQQ3 440 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 GPR63Q9BZJ6 419 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 ABCG8Q9H221 673 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 TRABDQ9H4I3 376 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 WDR26Q9H7D7 661 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 PKD2L2Q9NZM6 624 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 CD84Q9UIB8 345 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 TTC7AQ9ULT0 858 aaPredicted RBP20.88■□□□□ 0.93
SEC13-217ENST00000482647 SNX12Q9UMY4 172 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 SHOC2Q9UQ13 582 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 ZNF711Q9Y462 761 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 PDE2AO00408 941 aaPredicted RBP20.87■□□□□ 0.93
SEC13-217ENST00000482647 AGTP01019 485 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 IFNB1P01574 187 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 CSF2P04141 144 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 FGF1P05230 155 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 GRK6P43250 576 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 SPINT3P49223 89 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 RANBP10Q6VN20 620 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 RFLNAQ6ZTI6 216 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 TMC3Q7Z5M5 1100 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 CCDC89Q8N998 374 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 FUBP1Q96AE4 644 aaKnown RBP20.87■□□□□ 0.93
SEC13-217ENST00000482647 OSBPL9Q96SU4 736 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 FICDQ9BVA6 458 aa20.87■□□□□ 0.93
SEC13-217ENST00000482647 H3BM21 787 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 K7ESM1 405 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 CES2O00748 559 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 METTL18O95568 372 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 PYGLP06737 847 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 CEACAM1P13688 526 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 NME1P15531 152 aaKnown RBP20.86■□□□□ 0.93
SEC13-217ENST00000482647 KELP23276 732 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 TEAD1P28347 426 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 CHRNA4P43681 627 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 KIAA1024LP59773 190 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 HNRNPKP61978 463 aaKnown RBP eCLIP20.86■□□□□ 0.93
SEC13-217ENST00000482647 BNIP3Q12983 259 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 EIF2B5Q13144 721 aaKnown RBP20.86■□□□□ 0.93
SEC13-217ENST00000482647 RAET1GQ6H3X3 334 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 GATAD2AQ86YP4 633 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 DEFB124Q8NES8 71 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 RHBDD1Q8TEB9 315 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 BTN2A2Q8WVV5 523 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 MS4A14Q96JA4 679 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 CDH19Q9H159 772 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 FAM83DQ9H4H8 585 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 PHPT1Q9NRX4 125 aaPredicted RBP20.86■□□□□ 0.93
SEC13-217ENST00000482647 RAD18Q9NS91 495 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 KCND1Q9NSA2 647 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 HACD3Q9P035 362 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 SPO11Q9Y5K1 396 aa20.86■□□□□ 0.93
SEC13-217ENST00000482647 PGRMC1O00264 195 aaKnown RBP20.85■□□□□ 0.93
SEC13-217ENST00000482647 PSMD3O43242 534 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 SDC3O75056 442 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 KCNK5O95279 499 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 JUNDP17535 347 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 ADRA1AP35348 466 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 GPR1P46091 355 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 NOVA1P51513 510 aaKnown RBP20.85■□□□□ 0.93
SEC13-217ENST00000482647 PPARDQ03181 441 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 ENPP7Q6UWV6 458 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 GSTA5Q7RTV2 222 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 KLHDC8BQ8IXV7 354 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 PELI3Q8N2H9 469 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 PRELID2Q8N945 189 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 ACTRT1Q8TDG2 376 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 COG1Q8WTW3 980 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 SCAMP4Q969E2 229 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 EID2BQ96D98 161 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 WDR92Q96MX6 357 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 CAMK1GQ96NX5 476 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 RIOK2Q9BVS4 552 aaKnown RBP20.85■□□□□ 0.93
SEC13-217ENST00000482647 TEX101Q9BY14 249 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 PCOLCE2Q9UKZ9 415 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 ASCC3Q8N3C0 2202 aaKnown RBP20.85■□□□□ 0.93
SEC13-217ENST00000482647 CABIN1Q9Y6J0 2220 aa20.85■□□□□ 0.93
SEC13-217ENST00000482647 SLC4A1P02730 911 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 MYCLP1P12525 358 aaPredicted RBP20.84■□□□□ 0.93
SEC13-217ENST00000482647 TCP1P17987 556 aaKnown RBP20.84■□□□□ 0.93
SEC13-217ENST00000482647 DGKAP23743 735 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 BLKP51451 505 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 FAXCQ5TGI0 409 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 PSAPL1Q6NUJ1 521 aa20.84■□□□□ 0.93
SEC13-217ENST00000482647 ADAMTSL4Q6UY14 1074 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms