RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 PYGLP06737 847 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 GOLGA6DP0CG33 693 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 GPR1P46091 355 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 ZNF75DP51815 510 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 CDK3Q00526 305 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 PTSQ03393 145 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 TFDP2Q14188 446 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 TCEA2Q15560 299 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 KCTD16Q68DU8 428 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 MFSD7Q6UXD7 560 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 NPNTQ6UXI9 565 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 ZNF765Q7L2R6 523 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 NRSN1Q8IZ57 195 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 CNTD1Q8N815 330 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 KYQ8NBH2 561 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 GRAMD1AQ96CP6 724 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 AP2M1Q96CW1 435 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 OLFM3Q96PB7 478 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 CCDC3Q9BQI4 270 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 TMEM168Q9H0V1 697 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 RBSNQ9H1K0 784 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 GOLGA6AQ9NYA3 693 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 PCDHB1Q9Y5F3 818 aa15.32■□□□□ 0.04
EXOSC3-205ENST00000482614 ADAMTS20P59510 1910 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 RP1P56715 2156 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 ANKRD66B4E2M5 251 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 USP12O75317 370 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 MMP2P08253 660 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 ACTN2P35609 894 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 CD86P42081 329 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 NR2C2P49116 596 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 STC1P52823 247 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 DYNLT1P63172 113 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 SKOR1P84550 965 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 ZBTB17Q13105 803 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 TAZQ16635 292 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 ISXQ2M1V0 245 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 OGFOD3Q6PK18 319 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 RBM44Q6ZP01 1051 aaKnown RBP15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 FAM46DQ8NEK8 389 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 LPCAT1Q8NF37 534 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 GPR156Q8NFN8 814 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 SMIM14Q96QK8 99 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 PANX2Q96RD6 677 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 LYSMD1Q96S90 227 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 MLPHQ9BV36 600 aaPredicted RBP15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 ADGRE3Q9BY15 652 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 FRMD8Q9BZ67 464 aaPredicted RBP15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 CARS2Q9HA77 564 aaKnown RBP15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 CD84Q9UIB8 345 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 LHX6Q9UPM6 363 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 EPN1Q9Y6I3 576 aaPredicted RBP15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 DMXL2Q8TDJ6 3036 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 URB1O60287 2271 aaKnown RBP15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 ACACAQ13085 2346 aa15.31■□□□□ 0.04
EXOSC3-205ENST00000482614 A0A087WV48 116 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 A0A0U1RQS6 177 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 BRINP1O60477 761 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 CEACAM5P06731 702 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 CDKN2BP42772 138 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 QPCTQ16769 361 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 FREM2Q5SZK8 3169 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 C19orf48Q6RUI8 117 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 ADAMTSL4Q6UY14 1074 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 SPOCD1Q6ZMY3 1216 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 RFLNAQ6ZTI6 216 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 NT5DC3Q86UY8 548 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 TMTC1Q8IUR5 882 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 LSMEM2Q8N112 164 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 GPBAR1Q8TDU6 330 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 CCDC74AQ96AQ1 378 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 CALR3Q96L12 384 aaKnown RBP15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 GSDMCQ9BYG8 508 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 TRNAU1APQ9NX07 287 aaKnown RBP15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 SEPT10Q9P0V9 454 aa15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.3■□□□□ 0.04
EXOSC3-205ENST00000482614 COL27A1Q8IZC6 1860 aaPredicted RBP15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 TLX3O43711 291 aaPredicted RBP15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 CST8O60676 142 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 ZRANB2O95218 330 aaKnown RBP eCLIP15.29■□□□□ 0.041e-7■□□□□ 10.3
EXOSC3-205ENST00000482614 NDUFA10O95299 355 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 IPO7O95373 1038 aaKnown RBP15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 CLDN7O95471 211 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 IVLP07476 585 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 LSSP48449 732 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 ILF3Q12906 894 aaKnown RBP eCLIP15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 PEX6Q13608 980 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 SPIDRQ14159 915 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 SLC14A2Q15849 920 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 TEX44Q53QW1 395 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 C11orf63Q6NUN7 778 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 KATNAL2Q8IYT4 538 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 RCOR2Q8IZ40 523 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 EXD1Q8NHP7 514 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 CCL4L1Q8NHW4 92 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 SNIP1Q8TAD8 396 aaKnown RBP15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 KIAA1524Q8TCG1 905 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 CCHCR1Q8TD31 782 aa15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 HNRNPLLQ8WVV9 542 aaKnown RBP15.29■□□□□ 0.04
EXOSC3-205ENST00000482614 FGF11Q92914 225 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms