RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 DNAJC28Q9NX36 388 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 MTMR10Q9NXD2 777 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 DDX43Q9NXZ2 648 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 FLRT1Q9NZU1 646 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 IGSF9Q9P2J2 1179 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 GRHPRQ9UBQ7 328 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 ST3GAL5Q9UNP4 418 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 RPL26L1Q9UNX3 145 aaKnown RBP7.82□□□□□ -1.16
SNX13-208ENST00000482558 CORO2BQ9UQ03 480 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 CHMP2BQ9UQN3 213 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 PCDHA11Q9Y5I1 949 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 SNX13Q9Y5W8 968 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 CDY2AQ9Y6F7 541 aa7.82□□□□□ -1.16
SNX13-208ENST00000482558 TRIP11Q15643 1979 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 SHISA3A0PJX4 238 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 FAM159BA6NKW6 160 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 M0QYT0 321 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 EEF2KO00418 725 aaKnown RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 COPEO14579 308 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 PTGESO14684 152 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 INPPL1O15357 1258 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 BIRC5O15392 142 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 ALDH1A2O94788 518 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 POLBP06746 335 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 CYBAP13498 195 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 RPL17P18621 184 aaKnown RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 TYMPP19971 482 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 AGXTP21549 392 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 HTR1BP28222 390 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 RPA3P35244 121 aaPredicted RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 ADRA1BP35368 520 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 HADHAP40939 763 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 TKTL1P51854 596 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 DAOAP59103 153 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 GPR85P60893 370 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 DCAF7P61962 342 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 BNIP1Q12981 228 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 GRIK3Q13003 919 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 PPP2R5DQ14738 602 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 UAP1L1Q3KQV9 507 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 KBTBD12Q3ZCT8 623 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 ANKRD20A2Q5SQ80 823 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 ANKRD20A1Q5TYW2 823 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 ANKRD20A3Q5VUR7 823 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 WSCD1Q658N2 575 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 STEAP4Q687X5 459 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 NCBP2-AS2Q69YL0 99 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 PM20D1Q6GTS8 502 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 RSPO2Q6UXX9 243 aaPredicted RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 CAND1Q86VP6 1230 aaKnown RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 LZTR1Q8N653 840 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 ARL6IP6Q8N6S5 226 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 CCDC63Q8NA47 563 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.81□□□□□ -1.163e-7■■■■■ 37.7
SNX13-208ENST00000482558 MZB1Q8WU39 189 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 UCMAQ8WVF2 138 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 ZNF75CPQ92670 426 aaPredicted RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 PIWIL1Q96J94 861 aaKnown RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 LRRC37BQ96QE4 947 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 PAIP2Q9BPZ3 127 aaKnown RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 CCDC68Q9H2F9 335 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 MANSC1Q9H8J5 431 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 SAR1AQ9NR31 198 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 OLA1Q9NTK5 396 aaKnown RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 GPATCH2Q9NW75 528 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 DTLQ9NZJ0 730 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 GIMAP2Q9UG22 337 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 FBXW11Q9UKB1 542 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 SF3B6Q9Y3B4 125 aaKnown RBP7.81□□□□□ -1.16
SNX13-208ENST00000482558 NME7Q9Y5B8 376 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 GPR45Q9Y5Y3 372 aa7.81□□□□□ -1.16
SNX13-208ENST00000482558 SCN10AQ9Y5Y9 1956 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 A0A0U1RQF3 1178 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 TCRBV7S3A2A0A539 114 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 TRIM64A6NGJ6 449 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 ARL5CA6NH57 179 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 TRIM64BA6NI03 449 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 I3L4J1 428 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 M0QZQ0 153 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 DNM1LO00429 736 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 CHUKO15111 745 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 SPAG7O75391 227 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 CCNB1P14635 433 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 CREB1P16220 341 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 PGAM1P18669 254 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 HNRNPH1P31943 449 aaKnown RBP7.8□□□□□ -1.16
SNX13-208ENST00000482558 CRHR1P34998 444 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 GARSP41250 739 aaKnown RBP7.8□□□□□ -1.16
SNX13-208ENST00000482558 BEX3Q00994 111 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 GBE1Q04446 702 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 MGAT3Q09327 533 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 TUSC3Q13454 348 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 DPYSQ14117 519 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 PRPSAP1Q14558 356 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 SLC14A2Q15849 920 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 SNCBQ16143 134 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 CCL14Q16627 93 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 CA9Q16790 459 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 UPP1Q16831 310 aa7.8□□□□□ -1.16
SNX13-208ENST00000482558 INSCQ1MX18 579 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms