RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 RAET1GQ6H3X3 334 aa20.78■□□□□ 0.92
NELFE-208ENST00000481121 DARS2Q6PI48 645 aaKnown RBP20.78■□□□□ 0.92
NELFE-208ENST00000481121 TECPR1Q7Z6L1 1165 aa20.78■□□□□ 0.92
NELFE-208ENST00000481121 PELI3Q8N2H9 469 aa20.78■□□□□ 0.92
NELFE-208ENST00000481121 PNPLA1Q8N8W4 532 aa20.78■□□□□ 0.92
NELFE-208ENST00000481121 LMX1AQ8TE12 382 aa20.78■□□□□ 0.92
NELFE-208ENST00000481121 ANP32BQ92688 251 aaKnown RBP20.78■□□□□ 0.92
NELFE-208ENST00000481121 TCEAL2Q9H3H9 227 aaPredicted RBP20.78■□□□□ 0.92
NELFE-208ENST00000481121 NLGN3Q9NZ94 848 aa20.78■□□□□ 0.92
NELFE-208ENST00000481121 SPASTQ9UBP0 616 aa20.78■□□□□ 0.92
NELFE-208ENST00000481121 ANGPTL2Q9UKU9 493 aa20.78■□□□□ 0.92
NELFE-208ENST00000481121 PPP2R2CQ9Y2T4 447 aa20.78■□□□□ 0.92
NELFE-208ENST00000481121 SCAMP1O15126 338 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 KCNN4O15554 427 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 ZNF189O75820 626 aaPredicted RBP20.77■□□□□ 0.92
NELFE-208ENST00000481121 NDST3O95803 873 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 DPTQ07507 201 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 KLF1Q13351 362 aaPredicted RBP20.77■□□□□ 0.92
NELFE-208ENST00000481121 ALG11Q2TAA5 492 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 PRRT3Q5FWE3 981 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 ITPRIPL1Q6GPH6 555 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 CCDC70Q6NSX1 233 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 SLCO6A1Q86UG4 719 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 HEATR4Q86WZ0 1026 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 HID1Q8IV36 788 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 CCHCR1Q8TD31 782 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 TSACCQ96A04 125 aaPredicted RBP20.77■□□□□ 0.92
NELFE-208ENST00000481121 AP2M1Q96CW1 435 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 TBATAQ96M53 351 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 FCRL5Q96RD9 977 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 LRRC61Q9BV99 259 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 GBA3Q9H227 469 aa20.77■□□□□ 0.92
NELFE-208ENST00000481121 PHPT1Q9NRX4 125 aaPredicted RBP20.77■□□□□ 0.92
NELFE-208ENST00000481121 AKAP13Q12802 2813 aa20.77■□□□□ 0.91
NELFE-208ENST00000481121 CHD8Q9HCK8 2581 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 ZFC3H1O60293 1989 aaKnown RBP20.76■□□□□ 0.91
NELFE-208ENST00000481121 TRIM38O00635 465 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 SIGLEC6O43699 453 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 RASGRP1O95267 797 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 HOXC4P09017 264 aaPredicted RBP20.76■□□□□ 0.91
NELFE-208ENST00000481121 MYCLP1P12525 358 aaPredicted RBP20.76■□□□□ 0.91
NELFE-208ENST00000481121 HK3P52790 923 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 DNAJC3Q13217 504 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 CCDC157Q569K6 752 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 MEI1Q5TIA1 1274 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 RFLNAQ6ZTI6 216 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 ZNF765Q7L2R6 523 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 RD3Q7Z3Z2 195 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 RAVER1Q8IY67 606 aaKnown RBP20.76■□□□□ 0.91
NELFE-208ENST00000481121 TRIM58Q8NG06 486 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 OR56A4Q8NGH8 313 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 ADAMTS14Q8WXS8 1223 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 PDXPQ96GD0 296 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 DUSP23Q9BVJ7 150 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 ABCG8Q9H221 673 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 PKD2L2Q9NZM6 624 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 CSNK1G3Q9Y6M4 447 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 BPTFQ12830 3046 aa20.76■□□□□ 0.91
NELFE-208ENST00000481121 TMEM202A6NGA9 273 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 PDE2AO00408 941 aaPredicted RBP20.75■□□□□ 0.91
NELFE-208ENST00000481121 HYAL3O43820 417 aaPredicted RBP20.75■□□□□ 0.91
NELFE-208ENST00000481121 SLC4A1P02730 911 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 PIRTP0C851 137 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 GIMD1P0DJR0 217 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 GPR1P46091 355 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 WNT3AP56704 352 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 SRP54P61011 504 aaKnown RBP20.75■□□□□ 0.91
NELFE-208ENST00000481121 SHC2P98077 582 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 MPP3Q13368 585 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 RPS6KA1Q15418 735 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 PROX2Q3B8N5 592 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 KDELC1Q6UW63 502 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 LYSMD3Q7Z3D4 306 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 NRSN1Q8IZ57 195 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 IPMKQ8NFU5 416 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 OXNAD1Q96HP4 312 aaPredicted RBP20.75■□□□□ 0.91
NELFE-208ENST00000481121 LGR4Q9BXB1 951 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 TEX101Q9BY14 249 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 FGF22Q9HCT0 170 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 ZNF711Q9Y462 761 aa20.75■□□□□ 0.91
NELFE-208ENST00000481121 ZNF106Q9H2Y7 1883 aaKnown RBP20.75■□□□□ 0.91
NELFE-208ENST00000481121 TOP3BO95985 862 aaKnown RBP20.74■□□□□ 0.91
NELFE-208ENST00000481121 CTSEP14091 401 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 TEAD1P28347 426 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 DAB2P98082 770 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 CDK3Q00526 305 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 C1orf61Q13536 156 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 CDKN3Q16667 212 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 ANKRD20A2Q5SQ80 823 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 ANKRD20A1Q5TYW2 823 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 ANKRD20A3Q5VUR7 823 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 RAB44Q7Z6P3 723 aaPredicted RBP20.74■□□□□ 0.91
NELFE-208ENST00000481121 SCAMP4Q969E2 229 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 FSD1LQ9BXM9 530 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 CARD9Q9H257 536 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 ZFYVE1Q9HBF4 777 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 MAGEE1Q9HCI5 957 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 MYLKQ15746 1914 aa20.74■□□□□ 0.91
NELFE-208ENST00000481121 TCRBV7S2A1N4TA0A589 114 aa20.73■□□□□ 0.91
NELFE-208ENST00000481121 DKK1O94907 266 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms