RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MC2RQ01718 297 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 MAP7Q14244 749 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 RAET1GQ6H3X3 334 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 TCTN3Q6NUS6 607 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 ESX1Q8N693 406 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 EFCAB3Q8N7B9 438 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 TSEN2Q8NCE0 465 aaKnown RBP16.06■□□□□ 0.16
DDX56-210ENST00000479440 OR2M4Q96R27 311 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 SLC38A3Q99624 504 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 CTRCQ99895 268 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 SELENOOQ9BVL4 669 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 SPRY4Q9C004 299 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 NDST4Q9H3R1 872 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 STN1Q9H668 368 aaKnown RBP16.06■□□□□ 0.16
DDX56-210ENST00000479440 PDP2Q9P2J9 529 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 B4GALT6Q9UBX8 382 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 PCDHB3Q9Y5E6 796 aa16.06■□□□□ 0.16
DDX56-210ENST00000479440 TEX15Q9BXT5 2789 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 A0A1W2PQ67 120 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 GOLGA6CA6NDK9 693 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 GOLGA6BA6NDN3 693 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 ARHGAP42A6NI28 874 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 CYP1A1P04798 512 aaPredicted RBP16.05■□□□□ 0.16
DDX56-210ENST00000479440 GOLGA6DP0CG33 693 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 DESP17661 470 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 NR1D1P20393 614 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 TEAD1P28347 426 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 ADCY8P40145 1251 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 STAT5AP42229 794 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 MLLT10P55197 1068 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 TPI1P60174 286 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 AP1S1P61966 158 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 RFTN1Q14699 578 aaPredicted RBP16.05■□□□□ 0.16
DDX56-210ENST00000479440 VWA3BQ502W6 1294 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 SNAP47Q5SQN1 464 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 KLHDC7AQ5VTJ3 777 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 HIST2H2BCQ6DN03 193 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 SCYL2Q6P3W7 929 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 WDR74Q6RFH5 385 aaPredicted RBP16.05■□□□□ 0.16
DDX56-210ENST00000479440 TRIM72Q6ZMU5 477 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 TIPARPQ7Z3E1 657 aaKnown RBP16.05■□□□□ 0.16
DDX56-210ENST00000479440 CCDC13Q8IYE1 715 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 SP110Q9HB58 689 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 PRDM8Q9NQV8 689 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 FBXO8Q9NRD0 319 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 GOLGA6AQ9NYA3 693 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 FZD10Q9ULW2 581 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 SLC17A4Q9Y2C5 497 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 KCNMB2Q9Y691 235 aa16.05■□□□□ 0.16
DDX56-210ENST00000479440 SPENQ96T58 3664 aaKnown RBP16.05■□□□□ 0.16
DDX56-210ENST00000479440 ANKRD62A6NC57 917 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 A8MX80 341 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 TRAFD1O14545 582 aaPredicted RBP16.04■□□□□ 0.16
DDX56-210ENST00000479440 DLGAP3O95886 979 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 UCHL3P15374 230 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 VIPR1P32241 457 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 UQCRFS1P47985 274 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 CDR2Q01850 454 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 CNGA3Q16281 694 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 ATP1A1-AS1Q5TC04 95 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 CAPRIN2Q6IMN6 1127 aaKnown RBP16.04■□□□□ 0.16
DDX56-210ENST00000479440 DPY19L2P1Q6NXN4 242 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 ASB18Q6ZVZ8 466 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 SSC4DQ8WTU2 575 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 SLC20A1Q8WUM9 679 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 DTD2Q96FN9 168 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 CELF6Q96J87 481 aaKnown RBP16.04■□□□□ 0.16
DDX56-210ENST00000479440 NAA15Q9BXJ9 866 aaKnown RBP16.04■□□□□ 0.16
DDX56-210ENST00000479440 NOCTQ9UK39 431 aaKnown RBP16.04■□□□□ 0.16
DDX56-210ENST00000479440 POLHQ9Y253 713 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 RPS6KL1Q9Y6S9 549 aa16.04■□□□□ 0.16
DDX56-210ENST00000479440 USP9YO00507 2555 aaPredicted RBP16.03■□□□□ 0.16
DDX56-210ENST00000479440 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.03■□□□□ 0.16
DDX56-210ENST00000479440 A8MU76 341 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 PSMD11O00231 422 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 PES1O00541 588 aaKnown RBP16.03■□□□□ 0.16
DDX56-210ENST00000479440 POLR1CO15160 346 aaPredicted RBP16.03■□□□□ 0.16
DDX56-210ENST00000479440 CCP110O43303 1012 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 SOCS5O75159 536 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 RFPL1O75677 317 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 HEXIM1O94992 359 aaKnown RBP16.03■□□□□ 0.16
DDX56-210ENST00000479440 CPP00450 1065 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 FUCA1P04066 466 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 RFC1P35251 1148 aaPredicted RBP16.03■□□□□ 0.16
DDX56-210ENST00000479440 NSFP46459 744 aaKnown RBP16.03■□□□□ 0.16
DDX56-210ENST00000479440 PAPOLAP51003 745 aaKnown RBP16.03■□□□□ 0.16
DDX56-210ENST00000479440 SCNN1BP51168 640 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 RENBPP51606 427 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 FMO1Q01740 532 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 NSUN2Q08J23 767 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX56-210ENST00000479440 LRP8Q14114 963 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 DENND2CQ68D51 928 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 DOK6Q6PKX4 331 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 ARHGAP22Q7Z5H3 698 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 ZNF761Q86XN6 746 aaPredicted RBP16.03■□□□□ 0.16
DDX56-210ENST00000479440 GALNT11Q8NCW6 608 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 SLC30A5Q8TAD4 765 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 SLC37A2Q8TED4 501 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 STK33Q9BYT3 514 aa16.03■□□□□ 0.16
DDX56-210ENST00000479440 ST14Q9Y5Y6 855 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms