RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 SAP25Q8TEE9 199 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 BTN2A2Q8WVV5 523 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 AP2M1Q96CW1 435 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 TRABDQ9H4I3 376 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 PHPT1Q9NRX4 125 aaPredicted RBP20.46■□□□□ 0.87
VARS-224ENST00000479051 HACD3Q9P035 362 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 ZNF711Q9Y462 761 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 OR1A2Q9Y585 309 aa20.46■□□□□ 0.87
VARS-224ENST00000479051 SH3BP5O60239 455 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 CSF2P04141 144 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 HOXC4P09017 264 aaPredicted RBP20.45■□□□□ 0.86
VARS-224ENST00000479051 CEACAM1P13688 526 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 NME1P15531 152 aaKnown RBP20.45■□□□□ 0.86
VARS-224ENST00000479051 TEAD1P28347 426 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 GPR1P46091 355 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 BLKP51451 505 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 KIAA1024LP59773 190 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 SNX1Q13596 522 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 SHBQ15464 509 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 HS1BP3Q53T59 392 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 SIRPB2Q5JXA9 342 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 DRICH1Q6PGQ1 229 aaPredicted RBP20.45■□□□□ 0.86
VARS-224ENST00000479051 DBX2Q6ZNG2 339 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 LYSMD3Q7Z3D4 306 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 NLRP8Q86W28 1048 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 SLC25A41Q8N5S1 370 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 CCDC89Q8N998 374 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 PLA2G15Q8NCC3 412 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 RHBDD1Q8TEB9 315 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 RTP4Q96DX8 246 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 WDR92Q96MX6 357 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 FICDQ9BVA6 458 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 CDH19Q9H159 772 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 CD84Q9UIB8 345 aa20.45■□□□□ 0.86
VARS-224ENST00000479051 A0A0U1RQS6 177 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 USP27XA6NNY8 438 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 PSMD3O43242 534 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 KCNK5O95279 499 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 IFNB1P01574 187 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 SLC4A1P02730 911 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 ATP1A1P05023 1023 aaKnown RBP20.44■□□□□ 0.86
VARS-224ENST00000479051 ATXN1LP0C7T5 689 aaKnown RBP20.44■□□□□ 0.86
VARS-224ENST00000479051 PIRTP0C851 137 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 JUNDP17535 347 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 TRIM23P36406 574 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 SPINT3P49223 89 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 GDF10P55107 478 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 PPARDQ03181 441 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 CDKN3Q16667 212 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 PSAPL1Q6NUJ1 521 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 KDM7AQ6ZMT4 941 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 GATAD2AQ86YP4 633 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 CDC6Q99741 560 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 SLC13A1Q9BZW2 595 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 ABCG8Q9H221 673 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 KLQ9UEF7 1012 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 FEZ2Q9UHY8 353 aaPredicted RBP20.44■□□□□ 0.86
VARS-224ENST00000479051 SHOC2Q9UQ13 582 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
VARS-224ENST00000479051 SPTBN4Q9H254 2564 aa20.44■□□□□ 0.86
VARS-224ENST00000479051 CABIN1Q9Y6J0 2220 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 NEMP2A6NFY4 417 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 SDC3O75056 442 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 PIAS2O75928 621 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 MYCLP1P12525 358 aaPredicted RBP20.43■□□□□ 0.86
VARS-224ENST00000479051 GNG11P61952 73 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 BNIP3Q12983 259 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 SIX1Q15475 284 aaPredicted RBP20.43■□□□□ 0.86
VARS-224ENST00000479051 ZNF542PQ5EBM4 170 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 PPM1JQ5JR12 505 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 TPRG1LQ5T0D9 272 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 FAXCQ5TGI0 409 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 ENPP7Q6UWV6 458 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 TMC3Q7Z5M5 1100 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 HEATR4Q86WZ0 1026 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 RASGEF1CQ8N431 466 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 FUBP1Q96AE4 644 aaKnown RBP20.43■□□□□ 0.86
VARS-224ENST00000479051 OSBPL9Q96SU4 736 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 FAM83DQ9H4H8 585 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 SPASTQ9UBP0 616 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 APOBEC3BQ9UH17 382 aaKnown RBP20.43■□□□□ 0.86
VARS-224ENST00000479051 PCOLCE2Q9UKZ9 415 aa20.43■□□□□ 0.86
VARS-224ENST00000479051 TTC7AQ9ULT0 858 aaPredicted RBP20.43■□□□□ 0.86
VARS-224ENST00000479051 DRG1Q9Y295 367 aaKnown RBP20.43■□□□□ 0.86
VARS-224ENST00000479051 K7ESM1 405 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 PGRMC1O00264 195 aaKnown RBP20.42■□□□□ 0.86
VARS-224ENST00000479051 CES2O00748 559 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 RASGRP1O95267 797 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 ALPPL2P10696 532 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 DGKAP23743 735 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 FDFT1P37268 417 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 CHRNA4P43681 627 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 EIF2B5Q13144 721 aaKnown RBP20.42■□□□□ 0.86
VARS-224ENST00000479051 C4orf22Q6V702 233 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 RFLNAQ6ZTI6 216 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 GSTA5Q7RTV2 222 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 ERMP1Q7Z2K6 904 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 PHACTR4Q8IZ21 702 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 BLOC1S5Q8TDH9 187 aa20.42■□□□□ 0.86
VARS-224ENST00000479051 SCAMP4Q969E2 229 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms