RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 SIK2Q9H0K1 926 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 RNF39Q9H2S5 420 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 CASS4Q9NQ75 786 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 PNPLA3Q9NST1 481 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 STAP1Q9ULZ2 295 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 AURKCQ9UQB9 309 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 TRAF6Q9Y4K3 522 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 TIMM13Q9Y5L4 95 aaPredicted RBP11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 A0A087WXM4 84 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 FAM95CA0A1B0GW59 222 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 YJEFN3A6XGL0 299 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 A8MX80 341 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 DFFAO00273 331 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 TRIM38O00635 465 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 DYNC1LI2O43237 492 aaPredicted RBP11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 SNAP91O60641 907 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 USP2O75604 605 aaPredicted RBP11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 ZNF182P17025 639 aaPredicted RBP11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 RPS12P25398 132 aaKnown RBP11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 GRM5P41594 1212 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 DPYSQ14117 519 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 IKBKEQ14164 716 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 TRIM25Q14258 630 aaKnown RBP11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 ARHGAP36Q6ZRI8 547 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 MOB2Q70IA6 237 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 DSG4Q86SJ6 1040 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 MFSD6LQ8IWD5 586 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 FAM47BQ8NA70 645 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 STYXQ8WUJ0 223 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 ISL2Q96A47 359 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 DCPSQ96C86 337 aaKnown RBP11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 GPR22Q99680 433 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 NFKBIZQ9BYH8 718 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 TRIM8Q9BZR9 551 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 RHOJQ9H4E5 214 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 FBRSL1Q9HCM7 1045 aaKnown RBP11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 MID2Q9UJV3 735 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 SLC8A2Q9UPR5 921 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 PCDHGA7Q9Y5G6 932 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 MCM3APO60318 1980 aa11.07□□□□□ -0.64
LRRFIP1-211ENST00000478958 SDHDO14521 159 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 ENPP3O14638 875 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 CLIC3O95833 236 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 STMN1P16949 149 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 KCNA5P22460 613 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 YWHAQP27348 245 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 MAP4P27816 1152 aaKnown RBP11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 HOXA11P31270 313 aaPredicted RBP11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 NOS2P35228 1153 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 HPCAL1P37235 193 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 C1QTNF8P60827 252 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 DSTNP60981 165 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 DNASE1L3Q13609 305 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 FASTKQ14296 549 aaKnown RBP11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 CARTPTQ16568 116 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 ZNF484Q5JVG2 852 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 CLEC6AQ6EIG7 209 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 PPP4R4Q6NUP7 873 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 ZBTB49Q6ZSB9 765 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 UNC93AQ86WB7 457 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 B3GALNT2Q8NCR0 500 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 DLG3Q92796 817 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 GLMNQ92990 594 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 EXT2Q93063 718 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 WNT8BQ93098 351 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 RNF34Q969K3 372 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 ULBP1Q9BZM6 244 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 IL22Q9GZX6 179 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 RMND5AQ9H871 391 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 CITO14578 2027 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 H3BRB1 525 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 ASNA1O43681 348 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 H2AFYO75367 372 aaKnown RBP11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 PMPCBO75439 489 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 TADA2AO75478 443 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 GNAO1P09471 354 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 USP17L7P0C7H9 530 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 GRIA3P42263 894 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 SLC12A2P55011 1212 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 TAS2R39P59534 338 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 GALNT1Q10472 559 aaPredicted RBP11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 CDH17Q12864 832 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 PRPSAP1Q14558 356 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 PAFAH1B3Q15102 231 aaKnown RBP11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 TSTD2Q5T7W7 516 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 ZNF470Q6ECI4 717 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 NEK5Q6P3R8 708 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 TMEM26Q6ZUK4 368 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 HEXDCQ8WVB3 486 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 RPL10LQ96L21 214 aaKnown RBP11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 HSFY1Q96LI6 401 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 NPY6RQ99463 290 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 SPON1Q9HCB6 807 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 ABI2Q9NYB9 513 aaPredicted RBP11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 KLQ9UEF7 1012 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 GTF2IRD1Q9UHL9 959 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 RWDD3Q9Y3V2 267 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 BRCA2P51587 3418 aa11.06□□□□□ -0.64
LRRFIP1-211ENST00000478958 PARP14Q460N5 1801 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms