RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ID4P47928 161 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 KCNJ1P48048 391 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 STC1P52823 247 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 MTM1Q13496 603 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 FZD2Q14332 565 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SPARCL1Q14515 664 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SLC1A5Q15758 541 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF423Q2M1K9 1284 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 P3H1Q32P28 736 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ALS2CLQ60I27 953 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 PARGQ86W56 976 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 GATAD2AQ86YP4 633 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 CCHCR1Q8TD31 782 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 BLOC1S5Q8TDH9 187 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SETD7Q8WTS6 366 aaKnown RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SCAMP4Q969E2 229 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 CAPZA3Q96KX2 299 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 NAPGQ99747 312 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 GPR63Q9BZJ6 419 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 WDR26Q9H7D7 661 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SUDS3Q9H7L9 328 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ZFYVE1Q9HBF4 777 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 AAR2Q9Y312 384 aaKnown RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SPO11Q9Y5K1 396 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SPTY2D1-AS1A0A0U1RR47 76 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 A0A1B0GTQ1 180 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 LOC285095A0A1B0GVY8 99 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 CACNB4O00305 520 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 AURKAO14965 403 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 SCAMP1O15126 338 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 GCATO75600 419 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 FGF1P05230 155 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 ITGAVP06756 1048 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 ZSCAN5DPP0CG00 497 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 HLA-DPA1P20036 260 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 SDHBP21912 280 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 HTR1BP28222 390 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 EPHA8P29322 1005 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 LMAN1P49257 510 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 TERF1P54274 439 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PFN3P60673 137 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 BNIP3Q12983 259 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PTK2BQ14289 1009 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 AGERQ15109 404 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 CCNG2Q16589 344 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 ESRP1Q6NXG1 681 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 MACC1Q6ZN28 852 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 NYAP1Q6ZVC0 841 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 GLT6D1Q7Z4J2 308 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 HEATR4Q86WZ0 1026 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 DCP2Q8IU60 420 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 NAXDQ8IW45 347 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 RASGEF1CQ8N431 466 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 OXR1Q8N573 874 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 GLIS1Q8NBF1 620 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 DEFB124Q8NES8 71 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 FAM174AQ8TBP5 190 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 LRRC45Q96CN5 670 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 AP2M1Q96CW1 435 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 RTP4Q96DX8 246 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 MS4A3Q96HJ5 214 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 CAMK1GQ96NX5 476 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 LYSMD1Q96S90 227 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 NAP1L3Q99457 506 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 TBL1YQ9BQ87 522 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 RTKNQ9BST9 563 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 APOOQ9BUR5 198 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 BPIFA1Q9NP55 256 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PIH1D1Q9NWS0 290 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PKD2L2Q9NZM6 624 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 MOSPD1Q9UJG1 213 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 ZKSCAN5Q9Y2L8 839 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 FREM2Q5SZK8 3169 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PLXNB3Q9ULL4 1909 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 ARHGEF17Q96PE2 2063 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 GOLGA6L10A0A0M3HER8 536 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 CTAGE9A4FU28 777 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 E7EVH7 732 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 INPP4BO15327 924 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 FFAR2O15552 330 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 BUD23O43709 281 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 SH3BP5O60239 455 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 DFNA5O60443 496 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 CD59P13987 128 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 TSHRP16473 764 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 JUNDP17535 347 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 STIP1P31948 543 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 GPR1P46091 355 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 SPINT3P49223 89 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 VPS41P49754 854 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 NOVA1P51513 510 aaKnown RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 YPEL5P62699 121 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 NFATC4Q14934 902 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 SHBQ15464 509 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 TRIP13Q15645 432 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-215ENST00000478531 CDKN3Q16667 212 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PARP6Q2NL67 630 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PSAPL1Q6NUJ1 521 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 PNCKQ6P2M8 343 aa6.88□□□□□ -1.31
BRCA1-215ENST00000478531 DOK6Q6PKX4 331 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms