RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 POLG2Q9UHN1 485 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 SLCO3A1Q9UIG8 710 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 TTC7AQ9ULT0 858 aaPredicted RBP3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 SNX9Q9Y5X1 595 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 PSAT1Q9Y617 370 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 NFS1Q9Y697 457 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 IGLV5-37A0A075B6J1 123 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 FAM237BA0A1B0GVD1 139 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 TCERG1O14776 1098 aaKnown RBP3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 USO1O60763 962 aaKnown RBP3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 HNRNPCL1O60812 293 aaKnown RBP3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 NDUFS7O75251 213 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 NKX2-2O95096 273 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 SCGB1D1O95968 90 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 EIF2S1P05198 315 aaKnown RBP3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 IL7RP16871 459 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 RRM1P23921 792 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 SSTR2P30874 369 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 F2RL1P55085 397 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 DCAF7P61962 342 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 TUBA1BP68363 451 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 MYBPHQ13203 477 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 MED22Q15528 200 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 CALCRLQ16602 461 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 EIF2S3LQ2VIR3 472 aaKnown RBP3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 ZNF585BQ52M93 769 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 NADSYN1Q6IA69 706 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 CYP20A1Q6UW02 462 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 SLC36A4Q6YBV0 504 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 PQLC2Q6ZP29 291 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 C1orf122Q6ZSJ8 110 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 TBC1D1Q86TI0 1168 aaPredicted RBP3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 PGBD5Q8N414 524 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 NGEFQ8N5V2 710 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 ARHGEF2Q92974 986 aaKnown RBP3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 RTP4Q96DX8 246 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 C1QTNF5Q9BXJ0 243 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 MUC13Q9H3R2 512 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 PPP1R3EQ9H7J1 279 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 CD93Q9NPY3 652 aa3.96□□□□□ -1.78
SMARCA1-204ENST00000478420 PI4KAP2A4QPH2 592 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 SOCS6O14544 535 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 SLC25A12O75746 678 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 MLYCDO95822 493 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 FTCDO95954 541 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 LAMP2P13473 410 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 PLA2G2AP14555 144 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 DAOP14920 347 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 RXRGP48443 463 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 PDLIM4P50479 330 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 ART1P52961 327 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 CEBPZQ03701 1054 aaKnown RBP3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 KIF5AQ12840 1032 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 MAMLD1Q13495 774 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 KEAP1Q14145 624 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 EIF4A2Q14240 407 aaKnown RBP3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 NFATC4Q14934 902 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 TOMM20Q15388 145 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 CTF1Q16619 201 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 ATP13A5Q4VNC0 1218 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 SNX30Q5VWJ9 437 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 SIGIRRQ6IA17 410 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 KIAA1161Q6NSJ0 714 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 TTI2Q6NXR4 508 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 KCTD18Q6PI47 426 aaPredicted RBP3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 NCEH1Q6PIU2 408 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 RHBDF2Q6PJF5 856 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 C16orf54Q6UWD8 224 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 C4orf50Q6ZRC1 276 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 MEPCEQ7L2J0 689 aaKnown RBP3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 ARHGAP12Q8IWW6 846 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 ADHFE1Q8IWW8 467 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 ANKRD52Q8NB46 1076 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 SNRNP27Q8WVK2 155 aaKnown RBP3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 RND1Q92730 232 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 ARHGEF26Q96DR7 871 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 PCGF1Q9BSM1 259 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 IL25Q9H293 177 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 KCNN2Q9H2S1 579 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 C6orf106Q9H6K1 298 aaPredicted RBP3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 POLR1BQ9H9Y6 1135 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 SLC28A3Q9HAS3 691 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 NOX4Q9NPH5 578 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 RRP7BPQ9NSQ0 103 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 CNOT8Q9UFF9 292 aaKnown RBP3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 FBXO2Q9UK22 296 aaPredicted RBP3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 MAU2Q9Y6X3 613 aa3.95□□□□□ -1.78
SMARCA1-204ENST00000478420 A0A1W2PQF6 199 aa3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 LIPT2A6NK58 231 aa3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 PROB1E7EW31 1015 aa3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 VCYO14598 125 aa3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 PLRG1O43660 514 aaKnown RBP3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 NDUFS3O75489 264 aa3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 TIPRLO75663 272 aa3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 ZBTB11O95625 1053 aaPredicted RBP3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 TGFB3P10600 412 aa3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 ACADMP11310 421 aa3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 SRCP12931 536 aa3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 CDH2P19022 906 aaPredicted RBP3.94□□□□□ -1.78
SMARCA1-204ENST00000478420 CAPN3P20807 821 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms