RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	FREM2	Q5SZK8	3169 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	PRSS38	A1L453	326 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	PSTPIP1	O43586	416 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	CS	O75390	466 aa	Known RBP	13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	TEAD1	P28347	426 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	CD86	P42081	329 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	GPR1	P46091	355 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	NR2C2	P49116	596 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	DYNLT1	P63172	113 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	PTS	Q03393	145 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	ZBTB17	Q13105	803 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	TFDP2	Q14188	446 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	MFSD7	Q6UXD7	560 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	NPNT	Q6UXI9	565 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	BZW1	Q7L1Q6	419 aa	Known RBP	13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	RAVER1	Q8IY67	606 aa	Known RBP	13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	LPCAT1	Q8NF37	534 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	OR6C4	Q8NGE1	309 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	AP2M1	Q96CW1	435 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	PANX2	Q96RD6	677 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	CCDC3	Q9BQI4	270 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	ADGRE3	Q9BY15	652 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	TMEM168	Q9H0V1	697 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	SEPT10	Q9P0V9	454 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	GPSM3	Q9Y4H4	160 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937	UNC13C	Q8NB66	2214 aa		13.78	□□□□□ -0.2
HDAC7-222	ENST00000477937		A0A0A6YYK5	440 aa	Predicted RBP	13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937		A0A0U1RQS6	177 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	CAPN8	A6NHC0	703 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	ANKRD66	B4E2M5	251 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	TCEA3	O75764	348 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	CEACAM5	P06731	702 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	PYGL	P06737	847 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	CDKN2B	P42772	138 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	CDK3	Q00526	305 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	ZNF765	Q7L2R6	523 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	NT5DC3	Q86UY8	548 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	NLRP8	Q86W28	1048 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	TMTC1	Q8IUR5	882 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	NRSN1	Q8IZ57	195 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	CNTD1	Q8N815	330 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	KY	Q8NBH2	561 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	FAM46D	Q8NEK8	389 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	GRAMD1A	Q96CP6	724 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	AGAP3	Q96P47	875 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	OLFM3	Q96PB7	478 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	SMIM14	Q96QK8	99 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	MLPH	Q9BV36	600 aa	Predicted RBP	13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	ABCG8	Q9H221	673 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	CARS2	Q9HA77	564 aa	Known RBP	13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	CD84	Q9UIB8	345 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	PCDHB1	Q9Y5F3	818 aa		13.77	□□□□□ -0.21
HDAC7-222	ENST00000477937	KIF26B	Q2KJY2	2108 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	C1orf232	A0A0U1RR37	186 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	BRINP1	O60477	761 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	CST8	O60676	142 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	USP12	O75317	370 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.76	□□□□□ -0.21	1e-6	■■■■■ 26.9
HDAC7-222	ENST00000477937	NDUFA10	O95299	355 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	IPO7	O95373	1038 aa	Known RBP	13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	CLDN7	O95471	211 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	MMP2	P08253	660 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	ACTN2	P35609	894 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	STC1	P52823	247 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	SKOR1	P84550	965 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	TAZ	Q16635	292 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	ISX	Q2M1V0	245 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	TEX44	Q53QW1	395 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	TFDP3	Q5H9I0	405 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	KAZN	Q674X7	775 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	C11orf63	Q6NUN7	778 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	OGFOD3	Q6PK18	319 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	ADAMTSL4	Q6UY14	1074 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	SPOCD1	Q6ZMY3	1216 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	RBM44	Q6ZP01	1051 aa	Known RBP	13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	RFLNA	Q6ZTI6	216 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	RCOR2	Q8IZ40	523 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	GPR156	Q8NFN8	814 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	CCHCR1	Q8TD31	782 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	SCAMP4	Q969E2	229 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	IMP4	Q96G21	291 aa	Known RBP	13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	LYSMD1	Q96S90	227 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	GOLPH3	Q9H4A6	298 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	DPEP2	Q9H4A9	486 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	TFR2	Q9UP52	801 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	ZZEF1	O43149	2961 aa		13.76	□□□□□ -0.21
HDAC7-222	ENST00000477937	APC2	O95996	2303 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937		A0A087WV48	116 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	SOWAHD	A6NJG2	315 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	SOD1	P00441	154 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	FUCA1	P04066	466 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	IVL	P07476	585 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	GNPDA1	P46926	289 aa		13.75	□□□□□ -0.21
HDAC7-222	ENST00000477937	ILF3	Q12906	894 aa	Known RBP eCLIP	13.75	□□□□□ -0.21

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