RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TTC39AQ5SRH9 613 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 ERAP2Q6P179 960 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 RINLQ6ZS11 566 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 RRAGAQ7L523 313 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 CPXCR1Q8N123 301 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 DBF4BQ8NFT6 615 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 MORC4Q8TE76 937 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 ATP8B4Q8TF62 1192 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 NSMCE1Q8WV22 266 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 APBB2Q92870 758 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 NEUROD6Q96NK8 337 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 TRAPPC9Q96Q05 1148 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 IFIH1Q9BYX4 1025 aaKnown RBP4.95□□□□□ -1.62
VPS50-214ENST00000477935 USP44Q9H0E7 712 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 FAM234AQ9H0X4 552 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 TLE6Q9H808 572 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 SPAG4Q9NPE6 437 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 ANAPC4Q9UJX5 808 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 BAG5Q9UL15 447 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 RCE1Q9Y256 329 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 DTX4Q9Y2E6 619 aa4.95□□□□□ -1.62
VPS50-214ENST00000477935 SMG1Q96Q15 3661 aaKnown RBP4.94□□□□□ -1.62
VPS50-214ENST00000477935 ZZEF1O43149 2961 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 TMEM8BA6NDV4 472 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 HMX3A6NHT5 357 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 FAM90A20PA6NIJ5 464 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 RSPH10B2B2RC85 870 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 ZC3H11AO75152 810 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS50-214ENST00000477935 NEURL1O76050 574 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 SYF2O95926 243 aaKnown RBP4.94□□□□□ -1.62
VPS50-214ENST00000477935 RSPH10BP0C881 870 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 SP9P0CG40 484 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 CNTN2Q02246 1040 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 UBE3AQ05086 875 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 GAD2Q05329 585 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 CDK18Q07002 472 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 BIRC2Q13490 618 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 ZNF528Q3MIS6 628 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 CES5AQ6NT32 575 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 TMEM200AQ86VY9 491 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 KLBQ86Z14 1044 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 OR6J1Q8NGC5 347 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 SPPL3Q8TCT6 385 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 CENPIQ92674 756 aaPredicted RBP4.94□□□□□ -1.62
VPS50-214ENST00000477935 PIGSQ96S52 555 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 HDHD5Q9BXW7 423 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 S1PR5Q9H228 398 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 ACAD9Q9H845 621 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 SLC38A10Q9HBR0 1119 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 GPR108Q9NPR9 543 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 WNT16Q9UBV4 365 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 ADD3Q9UEY8 706 aaKnown RBP4.94□□□□□ -1.62
VPS50-214ENST00000477935 KCND3Q9UK17 655 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 BARX2Q9UMQ3 279 aaPredicted RBP4.94□□□□□ -1.62
VPS50-214ENST00000477935 PKP3Q9Y446 797 aa4.94□□□□□ -1.62
VPS50-214ENST00000477935 CNOT1A5YKK6 2376 aaKnown RBP4.94□□□□□ -1.62
VPS50-214ENST00000477935 FAM90A10PA6NDY2 464 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 CD8B2A6NJW9 211 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 B4DLN1 442 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 H0Y3Z8 333 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 IPO5O00410 1097 aaKnown RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 OAZ2O95190 189 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 LDHAP00338 332 aaKnown RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 CRYABP02511 175 aaKnown RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 EEF2P13639 858 aaKnown RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 CASTP20810 708 aaKnown RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 PRPH2P23942 346 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 CHKAP35790 457 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 MRPL12P52815 198 aaKnown RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 FOXG1P55316 489 aaPredicted RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 RHAGQ02094 409 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 ZBTB16Q05516 673 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 PMPCAQ10713 525 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 TDGQ13569 410 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 BTG3Q14201 252 aaPredicted RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 SCN5AQ14524 2016 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 TCTN1Q2MV58 587 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 PRTGQ2VWP7 1150 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 CCDC158Q5M9N0 1113 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 FAM83BQ5T0W9 1011 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 NUGGCQ68CJ6 796 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 ANKRD54Q6NXT1 300 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 JMJD6Q6NYC1 403 aaPredicted RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 SLC30A9Q6PML9 568 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 TRAPPC11Q7Z392 1133 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 ANKS1BQ7Z6G8 1248 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 ADGRA1Q86SQ6 560 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 RBM23Q86U06 439 aaKnown RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 FBXO16Q8IX29 292 aaPredicted RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 PTGR2Q8N8N7 351 aaPredicted RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 FAM110DQ8TAY7 271 aaPredicted RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 CTAGE1Q96RT6 745 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 ARPC5LQ9BPX5 153 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 WACQ9BTA9 647 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 FRMD8Q9BZ67 464 aaPredicted RBP4.93□□□□□ -1.62
VPS50-214ENST00000477935 EBF3Q9H4W6 596 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 FZD3Q9NPG1 666 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 ARL15Q9NXU5 204 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 FEM1BQ9UK73 627 aa4.93□□□□□ -1.62
VPS50-214ENST00000477935 MYH13Q9UKX3 1938 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms