RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 POLR2LP62875 67 aaKnown RBP17.65■□□□□ 0.42
PTPN7-209ENST00000477554 PTSQ03393 145 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 ZNF211Q13398 564 aaPredicted RBP17.65■□□□□ 0.42
PTPN7-209ENST00000477554 NFATC4Q14934 902 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 PDK1Q15118 436 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 CDKN3Q16667 212 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 PRRT3Q5FWE3 981 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 TFDP3Q5H9I0 405 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 ENPP7Q6UWV6 458 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 RD3Q7Z3Z2 195 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 DCP2Q8IU60 420 aaKnown RBP17.65■□□□□ 0.42
PTPN7-209ENST00000477554 OR1E3Q8WZA6 343 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 SCAMP4Q969E2 229 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 EID2BQ96D98 161 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 FGF22Q9HCT0 170 aa17.65■□□□□ 0.42
PTPN7-209ENST00000477554 APOBEC3BQ9UH17 382 aaKnown RBP17.65■□□□□ 0.42
PTPN7-209ENST00000477554 APOBEC2Q9Y235 224 aaKnown RBP17.65■□□□□ 0.42
PTPN7-209ENST00000477554 CLDN7O95471 211 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 PYGMP11217 842 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 TSHRP16473 764 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 CXCR5P32302 372 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 NOMO1Q15155 1222 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 QPCTQ16769 361 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 RALGPS1Q5JS13 557 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 PNCKQ6P2M8 343 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 TECPR1Q7Z6L1 1165 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 HID1Q8IV36 788 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 COL27A1Q8IZC6 1860 aaPredicted RBP17.64■□□□□ 0.42
PTPN7-209ENST00000477554 NUS1Q96E22 293 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 DTD2Q96FN9 168 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 IFT43Q96FT9 208 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 APOLD1Q96LR9 279 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 TRIB3Q96RU7 358 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 C1QTNF7Q9BXJ2 289 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 PCDH9Q9HC56 1237 aa17.64■□□□□ 0.42
PTPN7-209ENST00000477554 GOLGA4Q13439 2230 aaKnown RBP17.64■□□□□ 0.41
PTPN7-209ENST00000477554 MYLKQ15746 1914 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 AQP9O43315 295 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 URI1O94763 535 aaPredicted RBP17.64■□□□□ 0.41
PTPN7-209ENST00000477554 HNRNPKP61978 463 aaKnown RBP eCLIP17.64■□□□□ 0.41
PTPN7-209ENST00000477554 YPEL5P62699 121 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 MTM1Q13496 603 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 PCSK7Q16549 785 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 FAXCQ5TGI0 409 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 TRIM74Q86UV6 250 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 CCL4L1Q8NHW4 92 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 FAM174AQ8TBP5 190 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 TADA1Q96BN2 335 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 IMP4Q96G21 291 aaKnown RBP17.64■□□□□ 0.41
PTPN7-209ENST00000477554 GORASP1Q9BQQ3 440 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 SUDS3Q9H7L9 328 aaPredicted RBP17.64■□□□□ 0.41
PTPN7-209ENST00000477554 RNF14Q9UBS8 474 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 MSRB2Q9Y3D2 182 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 NEUROG3Q9Y4Z2 214 aa17.64■□□□□ 0.41
PTPN7-209ENST00000477554 ASXL3Q9C0F0 2248 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 EPG5Q9HCE0 2579 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 CFAP69A5D8W1 941 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 CAPN8A6NHC0 703 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 CEP104O60308 925 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 ZFXP17010 805 aaPredicted RBP17.63■□□□□ 0.41
PTPN7-209ENST00000477554 CKMT2P17540 419 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 PTPN7P35236 360 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 TRIM23P36406 574 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 POLD2P49005 469 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 SRP54P61011 504 aaKnown RBP17.63■□□□□ 0.41
PTPN7-209ENST00000477554 PPP2R5EQ16537 467 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 INAVAQ3KP66 663 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 ESRP1Q6NXG1 681 aaKnown RBP17.63■□□□□ 0.41
PTPN7-209ENST00000477554 UNQ6494/PRO21346Q6UXR6 183 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 CCNI2Q6ZMN8 369 aaPredicted RBP17.63■□□□□ 0.41
PTPN7-209ENST00000477554 TMPRSS7Q7RTY8 843 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 NAP1L3Q99457 506 aaPredicted RBP17.63■□□□□ 0.41
PTPN7-209ENST00000477554 ABCG8Q9H221 673 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 NLGN3Q9NZ94 848 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 EFR3BQ9Y2G0 817 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 PCYT1BQ9Y5K3 369 aaPredicted RBP17.63■□□□□ 0.41
PTPN7-209ENST00000477554 ST14Q9Y5Y6 855 aa17.63■□□□□ 0.41
PTPN7-209ENST00000477554 KMT2BQ9UMN6 2715 aaPredicted RBP17.62■□□□□ 0.41
PTPN7-209ENST00000477554 TCRBV7S2A1N4TA0A589 114 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 FAM221BA6H8Z2 402 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 GOLGA6CA6NDK9 693 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 GOLGA6BA6NDN3 693 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 PPP1R12AO14974 1030 aaPredicted RBP17.62■□□□□ 0.41
PTPN7-209ENST00000477554 YY2O15391 372 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 RFPL3O75679 317 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 TRIM16O95361 564 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 GOLGA6DP0CG33 693 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 CYP2A6P11509 494 aaPredicted RBP17.62■□□□□ 0.41
PTPN7-209ENST00000477554 NFKB1P19838 968 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 TGM2P21980 687 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 HK3P52790 923 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 STC1P52823 247 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 EPHB1P54762 984 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 PPARDQ03181 441 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 TFDP2Q14188 446 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 PTK2BQ14289 1009 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 SMAD1Q15797 465 aaKnown RBP17.62■□□□□ 0.41
PTPN7-209ENST00000477554 TEX44Q53QW1 395 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 BBS12Q6ZW61 710 aa17.62■□□□□ 0.41
PTPN7-209ENST00000477554 USP45Q70EL2 814 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms