RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 MAN1A1P33908 653 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 ETV3P41162 512 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 GPR3P46089 330 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 POLD2P49005 469 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 KLK7P49862 253 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 ARSDP51689 593 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 COPB1P53618 953 aaKnown RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 MLLT10P55197 1068 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 RAB15P59190 212 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 POLR2FP61218 127 aaKnown RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 CTBSQ01459 385 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 FMO1Q01740 532 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 NFATC2Q13469 925 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 TRA2AQ13595 282 aaKnown RBP eCLIP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 ZNF235Q14590 738 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 PPP6R3Q5H9R7 873 aaPredicted RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 MIIPQ5JXC2 388 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 ATP1A1-AS1Q5TC04 95 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 HIST2H2BCQ6DN03 193 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 DCUN1D2Q6PH85 259 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 CEACAM20Q6UY09 585 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 TRIM72Q6ZMU5 477 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 TRIM74Q86UV6 250 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 NRROSQ86YC3 692 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 NLGN4XQ8N0W4 816 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 NAGSQ8N159 534 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 UMODL1-AS1Q8N2C9 162 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 MLKLQ8NB16 471 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 NLGN4YQ8NFZ3 816 aaPredicted RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 OR10G6Q8NH81 332 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 PTCD2Q8WV60 388 aaKnown RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 APOBEC4Q8WW27 367 aaKnown RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 STARD8Q92502 1023 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 OR2M4Q96R27 311 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 EFHD1Q9BUP0 239 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 B3GNT4Q9C0J1 378 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 SLC39A8Q9C0K1 460 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 VPS16Q9H269 839 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 DHX35Q9H5Z1 703 aaKnown RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 STN1Q9H668 368 aaKnown RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 PDFQ9HBH1 243 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 FAM207AQ9NSI2 230 aaPredicted RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 DONSONQ9NYP3 566 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 TUBD1Q9UJT1 453 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 NOCTQ9UK39 431 aaKnown RBP6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 FZD10Q9ULW2 581 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 AP4E1Q9UPM8 1137 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 TP53TG5Q9Y2B4 290 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 PLEKHM1Q9Y4G2 1056 aa6.67□□□□□ -1.34
RTFDC1-206ENST00000477485 CFAP69A5D8W1 941 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 CAPN5O15484 640 aaPredicted RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 SNX2O60749 519 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 KATNA1O75449 491 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 STK17BO94768 372 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 MAP3K6O95382 1288 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 ASMTLO95671 621 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 CYP1A1P04798 512 aaPredicted RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 CEACAM5P06731 702 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 KRT7P08729 469 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 CHRNB2P17787 502 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 CTPS1P17812 591 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 GM2AP17900 193 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 NFKBIAP25963 317 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 MAP4P27816 1152 aaKnown RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 OAS2P29728 719 aaKnown RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 VIPR1P32241 457 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 SOX5P35711 763 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 TRIM23P36406 574 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 ADCY8P40145 1251 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 GPR1P46091 355 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 ZNF143P52747 638 aaPredicted RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 NDST2P52849 883 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 GPLD1P80108 840 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 CDK3Q00526 305 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 MC1RQ01726 317 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 FOXM1Q08050 763 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 KLRB1Q12918 225 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 LBRQ14739 615 aaKnown RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 CNGA3Q16281 694 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 CLPPQ16740 277 aaPredicted RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 FKBP15Q5T1M5 1219 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 AFMIDQ63HM1 303 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 TMEM71Q6P5X7 295 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 ARHGAP36Q6ZRI8 547 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 ZNF438Q7Z4V0 828 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 GALNT13Q8IUC8 556 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 TEX19Q8NA77 164 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 C3orf20Q8ND61 904 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 SLC37A2Q8TED4 501 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 NCSTNQ92542 709 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 CENPIQ92674 756 aaPredicted RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 RTP4Q96DX8 246 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 SLC45A3Q96JT2 553 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 TEFMQ96QE5 360 aaKnown RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 DPYSL5Q9BPU6 564 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 NAA15Q9BXJ9 866 aaKnown RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 LRRC19Q9H756 370 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 APMAPQ9HDC9 416 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 TRNAU1APQ9NX07 287 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms