RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 DPH6Q7L8W6 267 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 PTRH1Q86Y79 214 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 MMAAQ8IVH4 418 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 ACVR1CQ8NER5 493 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 MUL1Q969V5 352 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 FKBP10Q96AY3 582 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 TXNDC15Q96J42 360 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 UBXN10Q96LJ8 280 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 CSF3RQ99062 836 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 BDH2Q9BUT1 245 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 OSBPL2Q9H1P3 480 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 ACSS2Q9NR19 701 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 FZD10Q9ULW2 581 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 MAGED2Q9UNF1 606 aaPredicted RBP15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 EVPLQ92817 2033 aa15.26■□□□□ 0.03
CLSTN1-205ENST00000477264 SLC22A1O15245 554 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 PSMD3O43242 534 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 UGT2B11O75310 529 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 CAPN15O75808 1086 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 HPRP00739 348 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 NFICP08651 508 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 CXCL8P10145 99 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 HDCP19113 662 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 SERPINB1P30740 379 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 PRKCZQ05513 592 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 PRPSAP1Q14558 356 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 PERM1Q5SV97 790 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 PMF1Q6P1K2 205 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 CRTC3Q6UUV7 619 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 CUZD1Q86UP6 607 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 ITIH5Q86UX2 942 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 LACC1Q8IV20 430 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 RNF149Q8NC42 400 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 FAM110BQ8TC76 370 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 SETD4Q9NVD3 440 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 MFHAS1Q9Y4C4 1052 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 ISPDA4D126 451 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 ACKR2O00590 384 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 ANGPT2O15123 496 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 TPST1O60507 370 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 BCAS1O75363 584 aaPredicted RBP15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 MYO1DO94832 1006 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 C22orf31O95567 290 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 SNAP29O95721 258 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 IGHA2P01877 340 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 ITIH1P19827 911 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 GPX3P22352 226 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 CRHBPP24387 322 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 GRK3P35626 688 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 C1QTNF8P60827 252 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 SELENBP1Q13228 472 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 SPCS2Q15005 226 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 CYP51A1Q16850 503 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 KIAA0408Q6ZU52 694 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 FKBP9P1Q75LS8 142 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 THAP5Q7Z6K1 395 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 SLC41A1Q8IVJ1 513 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 SLC22A9Q8IVM8 553 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 CCDC185Q8N715 623 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 CCNYQ8ND76 341 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 MAGEE2Q8TD90 523 aaPredicted RBP15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 TSPEARQ8WU66 669 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 NXNL1Q96CM4 212 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 HPDLQ96IR7 371 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 CPB2Q96IY4 423 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 YME1L1Q96TA2 773 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 PRDM12Q9H4Q4 367 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 ASB7Q9H672 318 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 ATP13A3Q9H7F0 1226 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 ANKHQ9HCJ1 492 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 DNMT3BQ9UBC3 853 aaKnown RBP15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 TRHDEQ9UKU6 1024 aa15.25■□□□□ 0.03
CLSTN1-205ENST00000477264 TCRBV5S2A0A599 114 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 M0QX08 132 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 NCAM2O15394 837 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 NUAK1O60285 661 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 MGEA5O60502 916 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 PGK1P00558 417 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 AXLP30530 894 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 OXTRP30559 389 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 YAP1P46937 504 aaKnown RBP15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 CLCN3P51790 818 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 MAPK10P53779 464 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 ILF2Q12905 390 aaKnown RBP15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 SLX4IPQ5VYV7 408 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 SLC16A12Q6ZSM3 486 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 LARP4Q71RC2 724 aaKnown RBP eCLIP15.24■□□□□ 0.032e-9■□□□□ 10
CLSTN1-205ENST00000477264 SLC7A5P1Q8MH63 180 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 C8orf59Q8N0T1 100 aaPredicted RBP15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 RNF139Q8WU17 664 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 SLC35F5Q8WV83 523 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 DHRS1Q96LJ7 313 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 KIFC1Q9BW19 673 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 FUNDC2Q9BWH2 189 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 CFHR5Q9BXR6 569 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 NDEL1Q9GZM8 345 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 CDT1Q9H211 546 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 RNF186Q9NXI6 227 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 WARS2Q9UGM6 360 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms