RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 CFLARO15519 480 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 TLR5O60602 858 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 BCAS2O75934 225 aaPredicted RBP16.45■□□□□ 0.22
TMEM53-208ENST00000476724 NDST3O95803 873 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 GOT2P00505 430 aaKnown RBP16.45■□□□□ 0.22
TMEM53-208ENST00000476724 ACVRL1P37023 503 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 PSMD8P48556 350 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 CEACAM7Q14002 265 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 SFT2D3Q587I9 215 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 NADSYN1Q6IA69 706 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 TMEM207Q6UWW9 146 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 CATSPER1Q8NEC5 780 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 YME1L1Q96TA2 773 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 EBF3Q9H4W6 596 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 ALG9Q9H6U8 611 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 IL23AQ9NPF7 189 aa16.45■□□□□ 0.22
TMEM53-208ENST00000476724 TTC24A2A3L6 582 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 ZBBXA8MT70 800 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 SUPT7LO94864 414 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 PEX2P28328 305 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 ALDH1A3P47895 512 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 ATP4BP51164 291 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 HERVK_113P63132 956 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 RAB44Q7Z6P3 723 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 LDB1Q86U70 411 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 ICA1LQ8NDH6 482 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 OR4L1Q8NH43 312 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 RHEBL1Q8TAI7 183 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 BLOC1S5Q8TDH9 187 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 MARK4Q96L34 752 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 HERC2P3Q9BVR0 1158 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 ERVK-6Q9BXR3 956 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 SUDS3Q9H7L9 328 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 SEPT3Q9UH03 358 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 CRYL1Q9Y2S2 319 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 ASB3Q9Y575 518 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 KCTD3Q9Y597 815 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 CHD5Q8TDI0 1954 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 PSMD12O00232 456 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 TRIM38O00635 465 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 CRTAMO95727 393 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 PIM1P11309 404 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 CD1DP15813 335 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 LAG3P18627 525 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 XRCC1P18887 633 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 LRRC36Q1X8D7 754 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 CIR1Q86X95 450 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 LGI2Q8N0V4 545 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 CLYBLQ8N0X4 340 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 DNAJC1Q96KC8 554 aaKnown RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 TRAPPC9Q96Q05 1148 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 MGME1Q9BQP7 344 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 TTLL2Q9BWV7 592 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 FAM192AQ9GZU8 254 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 CCSER2Q9H7U1 834 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 CATSPERZQ9NTU4 200 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 INTS10Q9NVR2 710 aaKnown RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 EPS15L1Q9UBC2 864 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 DNMT3LQ9UJW3 386 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 SARDHQ9UL12 918 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 FIS1Q9Y3D6 152 aa16.44■□□□□ 0.22
TMEM53-208ENST00000476724 ARIH1Q9Y4X5 557 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-208ENST00000476724 OR51F1A6NGY5 319 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 ACSL4O60488 711 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 EFCAB14O75071 495 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 BAIAP3O94812 1187 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 ABLIM3O94929 683 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 FGF4P08620 206 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 UBTFL6P0CB48 400 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-208ENST00000476724 VCLP18206 1134 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 CES1P23141 567 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 ATP5C1P36542 298 aaKnown RBP16.43■□□□□ 0.22
TMEM53-208ENST00000476724 PLK1P53350 603 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 CDH4P55283 916 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 GNA12Q03113 381 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 PTK2BQ14289 1009 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 FASTKQ14296 549 aaKnown RBP16.43■□□□□ 0.22
TMEM53-208ENST00000476724 TYSND1Q2T9J0 566 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 RARS2Q5T160 578 aaKnown RBP16.43■□□□□ 0.22
TMEM53-208ENST00000476724 UBE2Q1Q7Z7E8 422 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 ZNF461Q8TAF7 563 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 BADQ92934 168 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 LRGUKQ96M69 825 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 NPAS2Q99743 824 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 TFB2MQ9H5Q4 396 aaKnown RBP16.43■□□□□ 0.22
TMEM53-208ENST00000476724 SYTL2Q9HCH5 934 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 SPG21Q9NZD8 308 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 AFF4Q9UHB7 1163 aaKnown RBP16.43■□□□□ 0.22
TMEM53-208ENST00000476724 ARL5AQ9Y689 179 aa16.43■□□□□ 0.22
TMEM53-208ENST00000476724 CCDC162PA2VCL2 907 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 CCL22O00626 93 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 MUSKO15146 869 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 SNRPB2P08579 225 aaKnown RBP16.42■□□□□ 0.22
TMEM53-208ENST00000476724 KCNC1P48547 511 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 SLC11A2P49281 568 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 ACADVLP49748 655 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 AQP4P55087 323 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 PKNOX1P55347 436 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 MMEL1Q495T6 779 aa16.42■□□□□ 0.22
TMEM53-208ENST00000476724 UNC50Q53HI1 259 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms