RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ERVPABLB-1P60509 514 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 CCL7P80098 99 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 CDK3Q00526 305 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 DSC2Q02487 901 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 SPIDRQ14159 915 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 TCEAL1Q15170 157 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 RFLNAQ6ZTI6 216 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 HEATR4Q86WZ0 1026 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 VSIG1Q86XK7 387 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 NRROSQ86YC3 692 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 RHOT2Q8IXI1 618 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 CCDC13Q8IYE1 715 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 PLD5Q8N7P1 536 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 RNF214Q8ND24 703 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 ZNF248Q8NDW4 579 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 CCL4L1Q8NHW4 92 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 GPBAR1Q8TDU6 330 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 CCDC74AQ96AQ1 378 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 HDAC11Q96DB2 347 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 TDRD1Q9BXT4 1180 aaKnown RBP10.78□□□□□ -0.68
SEC13-214ENST00000476597 ABCG8Q9H221 673 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 PRORYQ9H606 182 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 CARS2Q9HA77 564 aaKnown RBP10.78□□□□□ -0.68
SEC13-214ENST00000476597 SPTLC3Q9NUV7 552 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 HAUS2Q9NVX0 235 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 TRNAU1APQ9NX07 287 aaKnown RBP10.78□□□□□ -0.68
SEC13-214ENST00000476597 MOSPD1Q9UJG1 213 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 APPL1Q9UKG1 709 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 SATB2Q9UPW6 733 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 CHKBQ9Y259 395 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 PCDHGA8Q9Y5G5 932 aa10.78□□□□□ -0.68
SEC13-214ENST00000476597 A0A1W2PQM1 296 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 LRRD1A4D1F6 860 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 TMX2-CTNND1H3BSU7 103 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 JCHAINP01591 159 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 FGF1P05230 155 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 HLA-DQB2P05538 268 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 PNLIPP16233 465 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 GLB1P16278 677 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 ZNF30P17039 623 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 EPHB1P54762 984 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 PCBP4P57723 403 aaKnown RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 RPL26P61254 145 aaKnown RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 TLE3Q04726 772 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 CCDC173Q0VFZ6 552 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 TBX2Q13207 712 aaPredicted RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 HLTFQ14527 1009 aaKnown RBP eCLIP10.77□□□□□ -0.69
SEC13-214ENST00000476597 C3orf38Q5JPI3 329 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 CERCAMQ5T4B2 595 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 ZFYVE27Q5T4F4 411 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 LRRC38Q5VT99 294 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 LRRC66Q68CR7 880 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 SLC9A4Q6AI14 798 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 RAET1GQ6H3X3 334 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 ADAMTSL4Q6UY14 1074 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 C17orf82Q86X59 251 aaPredicted RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 SFTPA2Q8IWL1 248 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 SPACA3Q8IXA5 215 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 RAVER1Q8IY67 606 aaKnown RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 CNTD1Q8N815 330 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 CCNYQ8ND76 341 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 WDR36Q8NI36 951 aaKnown RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 PTCD2Q8WV60 388 aaKnown RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 SCARF2Q96GP6 870 aaPredicted RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 GFM1Q96RP9 751 aaKnown RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 LYSMD1Q96S90 227 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 LGMNQ99538 433 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 LRRN3Q9H3W5 708 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 DPEP2Q9H4A9 486 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 PCDH9Q9HC56 1237 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 SPATS2LQ9NUQ6 558 aaKnown RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 CD84Q9UIB8 345 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 INTUQ9ULD6 942 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 SUFUQ9UMX1 484 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 RPL26L1Q9UNX3 145 aaKnown RBP10.77□□□□□ -0.69
SEC13-214ENST00000476597 SLC17A4Q9Y2C5 497 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 ADAMTS20P59510 1910 aa10.77□□□□□ -0.69
SEC13-214ENST00000476597 PTPRQQ9UMZ3 2332 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 CCDC187A0A096LP49 1063 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 AKR1B15C9JRZ8 316 aaPredicted RBP10.76□□□□□ -0.69
SEC13-214ENST00000476597 NUDT21O43809 227 aaKnown RBP10.76□□□□□ -0.69
SEC13-214ENST00000476597 CLDN7O95471 211 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 SOD1P00441 154 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 RPLP0P05388 317 aaKnown RBP10.76□□□□□ -0.69
SEC13-214ENST00000476597 IVLP07476 585 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 MMP2P08253 660 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 CA4P22748 312 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 RBMS1P29558 406 aaKnown RBP10.76□□□□□ -0.69
SEC13-214ENST00000476597 SLC1A1P43005 524 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 GPR1P46091 355 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 GNPDA1P46926 289 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 POLD2P49005 469 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 STC1P52823 247 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 IFI35P80217 286 aaPredicted RBP10.76□□□□□ -0.69
SEC13-214ENST00000476597 SKOR1P84550 965 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 B4GALNT1Q00973 533 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 PPIDQ08752 370 aaKnown RBP10.76□□□□□ -0.69
SEC13-214ENST00000476597 C14orf28Q4W4Y0 310 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 ZNF765Q7L2R6 523 aa10.76□□□□□ -0.69
SEC13-214ENST00000476597 CNGA4Q8IV77 575 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms