RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 STK17BO94768 372 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 CYP1A1P04798 512 aaPredicted RBP16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 RFC1P35251 1148 aaPredicted RBP16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 ACTR1BP42025 376 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 POLD2P49005 469 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 ACTR1AP61163 376 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 POLR2LP62875 67 aaKnown RBP16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 CDK3Q00526 305 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 PEX6Q13608 980 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 MAN2A1Q16706 1144 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 TCTN3Q6NUS6 607 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 CEACAM20Q6UY09 585 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 ARHGAP22Q7Z5H3 698 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 SLC30A5Q8TAD4 765 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 CELF6Q96J87 481 aaKnown RBP16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 NSMCE3Q96MG7 304 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 ZPBPQ9BS86 351 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 TRIT1Q9H3H1 467 aaKnown RBP16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 NDST4Q9H3R1 872 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 APMAPQ9HDC9 416 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 FBXO8Q9NRD0 319 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 SLC17A4Q9Y2C5 497 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 KCTD3Q9Y597 815 aa16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 MRPS18BQ9Y676 258 aaKnown RBP16.41■□□□□ 0.22
APOBEC3F-203ENST00000476513 ENO4A6NNW6 628 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 MKRN2OSH3BPM6 223 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 DLGAP3O95886 979 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 IVLP07476 585 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 KRT3P12035 628 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 GNLYP22749 145 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 F8A1P23610 371 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 ERCC5P28715 1186 aaPredicted RBP16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 MAN1A1P33908 653 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 CNGA3Q16281 694 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 MIIPQ5JXC2 388 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 FHL5Q5TD97 284 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 CAPRIN2Q6IMN6 1127 aaKnown RBP16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 SCYL2Q6P3W7 929 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 WDR59Q6PJI9 974 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 ASB18Q6ZVZ8 466 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 OR10G6Q8NH81 332 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 AHCYL2Q96HN2 611 aaKnown RBP16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 PRDM8Q9NQV8 689 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 NOCTQ9UK39 431 aaKnown RBP16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 FZD10Q9ULW2 581 aa16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 RP1L1Q8IWN7 2480 aaPredicted RBP16.4■□□□□ 0.22
APOBEC3F-203ENST00000476513 TRBV23OR9-2A0A075B6M9 112 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 F8VZ95 297 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 FGF10O15520 208 aaPredicted RBP16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 VPS4BO75351 444 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 PALMO75781 387 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 UCHL3P15374 230 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 CHRNB2P17787 502 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 GPD1P21695 349 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 ETV3P41162 512 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 STAT5AP42229 794 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 FASLGP48023 281 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 PPM1FP49593 454 aaPredicted RBP16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 PAPOLAP51003 745 aaKnown RBP16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 NDST2P52849 883 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 COPB1P53618 953 aaKnown RBP16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 FMO1Q01740 532 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 VWA3BQ502W6 1294 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 DENND2CQ68D51 928 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 DOK6Q6PKX4 331 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 ZNF677Q86XU0 584 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 CCDC13Q8IYE1 715 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 SCARF2Q96GP6 870 aaPredicted RBP16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 SLC38A3Q99624 504 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 CINPQ9BW66 212 aaPredicted RBP16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 SLC39A8Q9C0K1 460 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 VPS4AQ9UN37 437 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 RPS6KL1Q9Y6S9 549 aa16.39■□□□□ 0.21
APOBEC3F-203ENST00000476513 HEXIM1O94992 359 aaKnown RBP16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 SCNN1BP51168 640 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 CDR2Q01850 454 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 NSUN2Q08J23 767 aaKnown RBP eCLIP16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 PTP4A2Q12974 167 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 RAET1GQ6H3X3 334 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 WDR74Q6RFH5 385 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 HSD11B1LQ7Z5J1 315 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 CBARPQ8N350 705 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 ESX1Q8N693 406 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 GALNT11Q8NCW6 608 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 SLC37A2Q8TED4 501 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 SSC4DQ8WTU2 575 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 DTD2Q96FN9 168 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 OR2M4Q96R27 311 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 STK33Q9BYT3 514 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 KCTD5Q9NXV2 234 aa16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 TEP1Q99973 2627 aaKnown RBP16.38■□□□□ 0.21
APOBEC3F-203ENST00000476513 SPENQ96T58 3664 aaKnown RBP16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 GOLGA6CA6NDK9 693 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 GOLGA6BA6NDN3 693 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 ARHGAP42A6NI28 874 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 CCP110O43303 1012 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 FURINP09958 794 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 GOLGA6DP0CG33 693 aa16.37■□□□□ 0.21
APOBEC3F-203ENST00000476513 RNF224P0DH78 156 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms