RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ANXA7P20073 488 aaKnown RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 DNASE1P24855 282 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 PTPN3P26045 913 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 SUOXP51687 545 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 ARSFP54793 590 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 TUBB4BP68371 445 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 HOXA4Q00056 320 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 ECT2LQ008S8 904 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 TEFQ10587 303 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 GRSF1Q12849 480 aaKnown RBP eCLIP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 ITGA7Q13683 1181 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 CAPSQ13938 189 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 KRT33BQ14525 404 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 KPNB1Q14974 876 aaKnown RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 RRS1Q15050 365 aaKnown RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 TAZQ16635 292 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 MEP1BQ16820 701 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 PFKFB3Q16875 520 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 PCGF3Q3KNV8 242 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 ANXA2RQ3ZCQ2 193 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 CXorf66Q5JRM2 361 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 MEX3CQ5U5Q3 659 aaKnown RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 ETFRF1Q6IPR1 90 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 LRRC8EQ6NSJ5 796 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 TMEM270Q6UE05 265 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 LCTLQ6UWM7 567 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 ABRAXAS1Q6UWZ7 409 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 OLFM4Q6UX06 510 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 DHRS13Q6UX07 377 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 RANBP10Q6VN20 620 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 GBP6Q6ZN66 633 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 MDGA2Q7Z553 956 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 SPRED1Q7Z699 444 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 DSG4Q86SJ6 1040 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 RPAINQ86UA6 219 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 GUF1Q8N442 669 aaKnown RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 ZCCHC9Q8N567 271 aaKnown RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 TSPAN14Q8NG11 270 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 BCAS4Q8TDM0 211 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 PTPMT1Q8WUK0 201 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 ZC3HAV1LQ96H79 300 aaKnown RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 CEP295NLQ96MC4 621 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 NLRP4Q96MN2 994 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 BBC3Q96PG8 261 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 TSGA13Q96PP4 275 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 PIMREGQ9BSJ6 248 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 NUAK2Q9H093 628 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 BPIFA1Q9NP55 256 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 SIRT3Q9NTG7 399 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 SEPT10Q9P0V9 454 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 XPO7Q9UIA9 1087 aaKnown RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 ICKQ9UPZ9 632 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 CARD8Q9Y2G2 431 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 RRP15Q9Y3B9 282 aaKnown RBP4.26□□□□□ -1.73
VPS13D-207ENST00000476169 LIPGQ9Y5X9 500 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 COL4A3Q01955 1670 aa4.26□□□□□ -1.73
VPS13D-207ENST00000476169 SPATA31A5Q5VU36 1347 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 SPATA31A6Q5VVP1 1343 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 SPATA31A7Q8IWB4 1347 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 RNF103-CHMP3A0A140T963 221 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 TCRBV5S1A1TA0A578 114 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 SMIM30A4D0T7 59 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 HTR3EA5X5Y0 456 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 RNF103O00237 685 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 OGG1O15527 345 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 PLRG1O43660 514 aaKnown RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 ZWINTO95229 277 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 GCNT3O95395 438 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 OLFM2O95897 454 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 HOXB5P09067 269 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 ACTN1P12814 892 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 ITGAXP20702 1163 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 CASTP20810 708 aaKnown RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 AGAP20933 346 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 TACR2P21452 398 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 PLA2G5P39877 138 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 CYP2J2P51589 502 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 LIMK1P53667 647 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 SIM1P81133 766 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 MZT1Q08AG7 82 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 KLHL30Q0D2K2 578 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 NPRL3Q12980 569 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 TRIM29Q14134 588 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 ZNF273Q14593 569 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 TAF7Q15545 349 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 DLG2Q15700 870 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 LEXMQ3ZCV2 418 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 FNDC1Q4ZHG4 1894 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 HSP90AA5PQ58FG0 334 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 AWAT1Q58HT5 328 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 TOR1AIP1Q5JTV8 583 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 HECTD2Q5U5R9 776 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 SFMBT2Q5VUG0 894 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 TMEM268Q5VZI3 342 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 TMEM211Q6ICI0 200 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 CES5AQ6NT32 575 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 SEPT14Q6ZU15 432 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 TAOK1Q7L7X3 1001 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 KLBQ86Z14 1044 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 RFX6Q8HWS3 928 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms