RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ECEL1O95672 775 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 GYPCP04921 128 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SERPING1P05155 500 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 PLA2G2AP14555 144 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 CCNB1P14635 433 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 PNLIPP16233 465 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 DESP17661 470 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ITIH1P19827 911 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 CD1CP29017 333 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 CCKBRP32239 447 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 VIPR1P32241 457 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 HSPA9P38646 679 aaKnown RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ARL4AP40617 200 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ETV5P41161 510 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ARSDP51689 593 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 INHBCP55103 352 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 CDH6P55285 790 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 MAZP56270 477 aaKnown RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 OR1D5P58170 312 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 CFHR1Q03591 330 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 DPTQ07507 201 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 NIPAL4Q0D2K0 466 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 DPYSL3Q14195 570 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 LY6DQ14210 128 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF235Q14590 738 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ASTE1Q2TB18 679 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 C14orf28Q4W4Y0 310 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 MARC1Q5VT66 337 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 NKAIN2Q5VXU1 208 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 LRRC66Q68CR7 880 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 NCBP2-AS2Q69YL0 99 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SPECC1LQ69YQ0 1117 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ALG1LQ6GMV1 187 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 USP53Q70EK8 1073 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF438Q7Z4V0 828 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SLITRK4Q8IW52 837 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 NAGSQ8N159 534 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 PQLC3Q8N755 202 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ATL2Q8NHH9 583 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 TEKT4Q8WW24 435 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 MAML1Q92585 1016 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SCAMP4Q969E2 229 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 PMEPA1Q969W9 287 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 EID2BQ96D98 161 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 NUS1Q96E22 293 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 TRIM11Q96F44 468 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 DTD2Q96FN9 168 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SCARF2Q96GP6 870 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 WDR24Q96S15 920 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SEMA3CQ99985 751 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 PACSIN1Q9BY11 444 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SUDS3Q9H7L9 328 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 CARS2Q9HA77 564 aaKnown RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 RDH14Q9HBH5 336 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 EPB41L5Q9HCM4 733 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 FOXJ2Q9P0K8 574 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 TAAR2Q9P1P5 351 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 IP6K2Q9UHH9 426 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 MOSPD1Q9UJG1 213 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 ANAPC7Q9UJX3 599 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 PHTF1Q9UMS5 762 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SUFUQ9UMX1 484 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 LOXL2Q9Y4K0 774 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 PCDHGA7Q9Y5G6 932 aa7.01□□□□□ -1.29
HDAC3-207ENST00000475549 BZW2Q9Y6E2 419 aaKnown RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 SETXQ7Z333 2677 aaKnown RBP7.01□□□□□ -1.29
HDAC3-207ENST00000475549 TP53BP1Q12888 1972 aaPredicted RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 MYLKQ15746 1914 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 PRAMEF33A0A0G2JMD5 474 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 B4DGG1 531 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 C9orf172C9J069 976 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 MYO1FO00160 1098 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 MATN3O15232 486 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 NVLO15381 856 aaKnown RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 MFSD11O43934 449 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 PRAMEF10O60809 474 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 EML2O95834 649 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 CPP00450 1065 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 MMP2P08253 660 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 CCL4P13236 92 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 WT1P19544 449 aaPredicted RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 KELP23276 732 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 TEAD1P28347 426 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 ALDH4A1P30038 563 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 HNRNPH3P31942 346 aaKnown RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 CASP14P31944 242 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 ADCY8P40145 1251 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 GARSP41250 739 aaKnown RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 MLLT3P42568 568 aaPredicted RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 GNPDA1P46926 289 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 UCNP55089 124 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 UBASH3AP57075 661 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 ZBED6P86452 979 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 CTBSQ01459 385 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 RHDQ02161 417 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 DSC2Q02487 901 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 GBE1Q04446 702 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 GALNT2Q10471 571 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 EIF3IQ13347 325 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms