RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 DUX1O43812 170 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 CEACAM5P06731 702 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 IVLP07476 585 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 UNGP13051 313 aaPredicted RBP12.58□□□□□ -0.4
SKA3-206ENST00000475251 AK4P27144 223 aaPredicted RBP12.58□□□□□ -0.4
SKA3-206ENST00000475251 TEAD1P28347 426 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 COPB1P53618 953 aaKnown RBP12.58□□□□□ -0.4
SKA3-206ENST00000475251 CDK3Q00526 305 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 ABHD18Q0P651 414 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 KLRB1Q12918 225 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 BECN1Q14457 450 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 SYCP1Q15431 976 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 C4orf17Q53FE4 359 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 NKAIN2Q5VXU1 208 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 ANKS6Q68DC2 871 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 WDR59Q6PJI9 974 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 KDELC2Q7Z4H8 507 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 NAGSQ8N159 534 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 ABHD17AQ96GS6 310 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 COQ10AQ96MF6 247 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 PSMG3-AS1Q96PY0 264 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 FRMD8Q9BZ67 464 aaPredicted RBP12.58□□□□□ -0.4
SKA3-206ENST00000475251 STN1Q9H668 368 aaKnown RBP12.58□□□□□ -0.4
SKA3-206ENST00000475251 LRRC4CQ9HCJ2 640 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 KCTD3Q9Y597 815 aa12.58□□□□□ -0.4
SKA3-206ENST00000475251 ARHGEF17Q96PE2 2063 aaPredicted RBP12.58□□□□□ -0.4
SKA3-206ENST00000475251 PSMD11O00231 422 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 TRAFD1O14545 582 aaPredicted RBP12.57□□□□□ -0.4
SKA3-206ENST00000475251 PPM1DO15297 605 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 NKX2-8O15522 239 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 SOCS5O75159 536 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 PRKAR1AP10644 381 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 CYP2A6P11509 494 aaPredicted RBP12.57□□□□□ -0.4
SKA3-206ENST00000475251 GM2AP17900 193 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 VIPR1P32241 457 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 CSF2RBP32927 897 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 SOX5P35711 763 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 ACTR1BP42025 376 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 RGRP47804 291 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 FASLGP48023 281 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 PAPOLAP51003 745 aaKnown RBP12.57□□□□□ -0.4
SKA3-206ENST00000475251 SCNN1BP51168 640 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 ACTR1AP61163 376 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 CTBSQ01459 385 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 LRP8Q14114 963 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 CAMK4Q16566 473 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 RAET1GQ6H3X3 334 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 DNAJC24Q6P3W2 148 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 PHF13Q86YI8 300 aaPredicted RBP12.57□□□□□ -0.4
SKA3-206ENST00000475251 LZTR1Q8N653 840 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 RTP4Q96DX8 246 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 CELF6Q96J87 481 aaKnown RBP12.57□□□□□ -0.4
SKA3-206ENST00000475251 SLC38A3Q99624 504 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 CNPY3Q9BT09 278 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 SLC39A8Q9C0K1 460 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 OCIAD1Q9NX40 245 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 PDP2Q9P2J9 529 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 B4GALT6Q9UBX8 382 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 SLC17A4Q9Y2C5 497 aa12.57□□□□□ -0.4
SKA3-206ENST00000475251 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 GOLGA6BA6NDN3 693 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 PRR19A6NJB7 356 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 A8MX80 341 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 EEF2KO00418 725 aaKnown RBP12.56□□□□□ -0.4
SKA3-206ENST00000475251 DAPK3O43293 454 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 HEXIM1O94992 359 aaKnown RBP12.56□□□□□ -0.4
SKA3-206ENST00000475251 TPM2P07951 284 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 CHRNB2P17787 502 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 TCN2P20062 427 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 MPSTP25325 297 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 EEF1GP26641 437 aaKnown RBP12.56□□□□□ -0.4
SKA3-206ENST00000475251 HSPA9P38646 679 aaKnown RBP12.56□□□□□ -0.4
SKA3-206ENST00000475251 ADCY8P40145 1251 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 CD97P48960 835 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 MC2RQ01718 297 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 IL10RBQ08334 325 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 PTP4A2Q12974 167 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 CNGA3Q16281 694 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 DEFB109BQ30KR1 87 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 TMCO4Q5TGY1 634 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 WDR74Q6RFH5 385 aaPredicted RBP12.56□□□□□ -0.4
SKA3-206ENST00000475251 BMPERQ8N8U9 685 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 TEX19Q8NA77 164 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 PATE1Q8WXA2 126 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 STARD8Q92502 1023 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 MIB2Q96AX9 1013 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 DTD2Q96FN9 168 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 ZNF599Q96NL3 588 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 MCEEQ96PE7 176 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 PSKH2Q96QS6 385 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 OR2M4Q96R27 311 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 FBXO8Q9NRD0 319 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 GOLGA6AQ9NYA3 693 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 PCDHB3Q9Y5E6 796 aa12.56□□□□□ -0.4
SKA3-206ENST00000475251 BLACEA4D250 179 aa12.55□□□□□ -0.4
SKA3-206ENST00000475251 MKRN2OSH3BPM6 223 aa12.55□□□□□ -0.4
SKA3-206ENST00000475251 GADD45BO75293 160 aaPredicted RBP12.55□□□□□ -0.4
SKA3-206ENST00000475251 CPP00450 1065 aa12.55□□□□□ -0.4
SKA3-206ENST00000475251 PYGLP06737 847 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms