RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 FAM35AQ86V20 835 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CAMK1DQ8IU85 385 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 RHPN2Q8IUC4 686 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 MYO1HQ8N1T3 1032 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 METTL4Q8N3J2 472 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 LINC01465Q8N7H1 131 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PCDH19Q8TAB3 1148 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CYGBQ8WWM9 190 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PCMTD1Q96MG8 357 aaPredicted RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 NARFLQ9H6Q4 476 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 NIPAL2Q9H841 368 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 TREX1Q9NSU2 369 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 B3GNT2Q9NY97 397 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 KLHL21Q9UJP4 597 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 KCNK7Q9Y2U2 307 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PCDHA1Q9Y5I3 950 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CCDC160A6NGH7 325 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TSPY2A6NKD2 308 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 QSOX1O00391 747 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MUSKO15146 869 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SLC7A4O43246 635 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SSX4O60224 188 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MAFO75444 373 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 MSL3P1P0C860 447 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CYP2C8P10632 490 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CD58P19256 250 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CYP2A7P20853 494 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CFL1P23528 166 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 HOXA6P31267 233 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ARL2P36404 184 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 EIF2B2P49770 351 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 DNA2P51530 1060 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 EIF3EP60228 445 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 TUBA1BP68363 451 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 BNIP2Q12982 314 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PAFAH1B3Q15102 231 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 MAPRE1Q15691 268 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 ERFEQ4G0M1 354 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 RAB6CQ53S08 254 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 C6orf141Q5SZD1 244 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.1□□□□□ -1.75
USP16-205ENST00000474835 GRTP1Q5TC63 336 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 LIPMQ5VYY2 423 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SPTY2D1Q68D10 685 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 LHX8Q68G74 356 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 DENND5AQ6IQ26 1287 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CYP4F22Q6NT55 531 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TUBA1AQ71U36 451 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PIWIL3Q7Z3Z3 882 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 IFNLR1Q8IU57 520 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 KIAA2013Q8IYS2 634 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TXNDC5Q8NBS9 432 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 RDM1Q8NG50 284 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 JOSD2Q8TAC2 188 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SETD7Q8WTS6 366 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 VPS33AQ96AX1 596 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PYCR2Q96C36 320 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 METTL2AQ96IZ6 378 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 MAP6Q96JE9 813 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MAGED4Q96JG8 741 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ACCSQ96QU6 501 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CCDC32Q9BV29 185 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PAIP1Q9H074 479 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 RAB6CQ9H0N0 254 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TUBB1Q9H4B7 451 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ZNF556Q9HAH1 456 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 AGO4Q9HCK5 861 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 ASNSD1Q9NWL6 643 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CUEDC1Q9NWM3 386 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 FAM118AQ9NWS6 357 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ASIC5Q9NY37 505 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SMPD3Q9NY59 655 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 MAP3K20Q9NYL2 800 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 COL20A1Q9P218 1284 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 RCOR3Q9P2K3 495 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 FBXW11Q9UKB1 542 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ADAMTS5Q9UNA0 930 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CFL2Q9Y281 166 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 GPSM3Q9Y4H4 160 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PCDHB13Q9Y5F0 798 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CDY2AQ9Y6F7 541 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CDY1Q9Y6F8 540 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 DSPPQ9NZW4 1301 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MYO15AQ9UKN7 3530 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 IGKV6-21A0A0C4DH24 114 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PPP6CO00743 305 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ABCD4O14678 606 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TEX28O15482 410 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 DCXO43602 365 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SELENOFO60613 162 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TSPAN1O60635 241 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CABYRO75952 493 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CHEK2O96017 543 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PGK1P00558 417 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SLC2A4P14672 509 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ATP6V1B1P15313 513 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 NR4A2P43354 598 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 OR3A3P47888 321 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CLCNKAP51800 687 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CRYBA2P53672 197 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms