RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 PERM1Q5SV97 790 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 LIPIQ6XZB0 460 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 USP45Q70EL2 814 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 DPPA4Q7L190 304 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 ZSWIM9Q86XI8 627 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 SYCE1Q8N0S2 351 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 PQLC3Q8N755 202 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 FAM46DQ8NEK8 389 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 NUS1Q96E22 293 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 PDXPQ96GD0 296 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 RBM41Q96IZ5 413 aaKnown RBP15.15■□□□□ 0.02
VARS-223ENST00000474643 TSGA10Q9BZW7 698 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 CLPBQ9H078 707 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 CYP4F12Q9HCS2 524 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 KCTD5Q9NXV2 234 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.15■□□□□ 0.02
VARS-223ENST00000474643 TRIM10Q9UDY6 481 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 PCDHGC4Q9Y5F7 938 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 ZNF487B1APH4 448 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 KLK10O43240 276 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 CETN2P41208 172 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 EPHB1P54762 984 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 TMPRSS3P57727 454 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 KIAA1024LP59773 190 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 GALNT2Q10471 571 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 TFDP2Q14188 446 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 LLGL1Q15334 1064 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 ARMC12Q5T9G4 340 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 CCDC181Q5TID7 509 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 MFSD7Q6UXD7 560 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 SPOCD1Q6ZMY3 1216 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 GPR155Q7Z3F1 870 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 PEX26Q7Z412 305 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 VSIG1Q86XK7 387 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 SPACA3Q8IXA5 215 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 KATNAL2Q8IYT4 538 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 RCOR2Q8IZ40 523 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 PLA2G15Q8NCC3 412 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 CCDC74AQ96AQ1 378 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 VOPP1Q96AW1 172 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 ECHDC3Q96DC8 303 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 CCDC97Q96F63 343 aaPredicted RBP15.14■□□□□ 0.01
VARS-223ENST00000474643 NUDCD1Q96RS6 583 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 ZMYND15Q9H091 742 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 DPEP2Q9H4A9 486 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 EPB41L5Q9HCM4 733 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 NT5MQ9NPB1 228 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 PHPT1Q9NRX4 125 aaPredicted RBP15.14■□□□□ 0.01
VARS-223ENST00000474643 B4GALT6Q9UBX8 382 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 AMFRQ9UKV5 643 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 ADGRG1Q9Y653 693 aa15.14■□□□□ 0.01
VARS-223ENST00000474643 TTC24A2A3L6 582 aaPredicted RBP15.13■□□□□ 0.01
VARS-223ENST00000474643 C3orf70A6NLC5 250 aaPredicted RBP15.13■□□□□ 0.01
VARS-223ENST00000474643 TMX2-CTNND1H3BSU7 103 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 LOC400499M0QZD8 3231 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 KRT86O43790 486 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 CCDC175P0C221 793 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 CA4P22748 312 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 VIPR1P32241 457 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 PPM1FP49593 454 aaPredicted RBP15.13■□□□□ 0.01
VARS-223ENST00000474643 TLE3Q04726 772 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 AP1B1Q10567 949 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 AGERQ15109 404 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 SOWAHCQ53LP3 525 aaPredicted RBP15.13■□□□□ 0.01
VARS-223ENST00000474643 TFDP3Q5H9I0 405 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 RAET1GQ6H3X3 334 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 JAMLQ86YT9 394 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.13■□□□□ 0.01
VARS-223ENST00000474643 Q8N9G6 341 aaPredicted RBP15.13■□□□□ 0.01
VARS-223ENST00000474643 WDR36Q8NI36 951 aaKnown RBP15.13■□□□□ 0.01
VARS-223ENST00000474643 KRT35Q92764 455 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 FUBP1Q96AE4 644 aaKnown RBP15.13■□□□□ 0.01
VARS-223ENST00000474643 DTLQ9NZJ0 730 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 PNMA8BQ9ULN7 279 aaPredicted RBP15.13■□□□□ 0.01
VARS-223ENST00000474643 PHTF1Q9UMS5 762 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 GUCA1BQ9UMX6 200 aa15.13■□□□□ 0.01
VARS-223ENST00000474643 CCDC187A0A096LP49 1063 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 CCDC66A2RUB6 948 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 GRID2IPA4D2P6 1211 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 TMEM202A6NGA9 273 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 TRAFD1O14545 582 aaPredicted RBP15.12■□□□□ 0.01
VARS-223ENST00000474643 PPP1R12AO14974 1030 aaPredicted RBP15.12■□□□□ 0.01
VARS-223ENST00000474643 MATN3O15232 486 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 ZW10O43264 779 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 CST8O60676 142 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 RPLP0P05388 317 aaKnown RBP15.12■□□□□ 0.01
VARS-223ENST00000474643 CCNCP24863 283 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 CTNNA1P35221 906 aaKnown RBP15.12■□□□□ 0.01
VARS-223ENST00000474643 CDKN2BP42772 138 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 MARCKSL1P49006 195 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 RWDD2BP57060 319 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 MAXP61244 160 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 RALGDSQ12967 914 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 PDK1Q15118 436 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 TAF1BQ53T94 588 aaPredicted RBP15.12■□□□□ 0.01
VARS-223ENST00000474643 RALGPS1Q5JS13 557 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 SLC9A4Q6AI14 798 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 PNCKQ6P2M8 343 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 NPNTQ6UXI9 565 aa15.12■□□□□ 0.01
VARS-223ENST00000474643 BZW1Q7L1Q6 419 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms