RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 TMEM9Q9P0T7 183 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 TAAR2Q9P1P5 351 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 PLEKHB1Q9UF11 243 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 DNAJC12Q9UKB3 198 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 PILRAQ9UKJ1 303 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 ST14Q9Y5Y6 855 aa5.14□□□□□ -1.59
SNRNP40-204ENST00000474025 SETD2Q9BYW2 2564 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 IGHV1OR21-1A0A087WYE8 117 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 LOC101059948A0A1B0GTJ6 334 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 GOLGA6L4A6NEF3 574 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 C2CD4BA6NLJ0 364 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 EFCAB7A8K855 629 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 B4E171 279 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 RASA4BC9J798 803 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 PPM1DO15297 605 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 ZW10O43264 779 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 RASA4O43374 803 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 KRT38O76015 456 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 ECEL1O95672 775 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 FGFR1OPO95684 399 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 FUCA1P04066 466 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 CEACAM5P06731 702 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 ELFN1P0C7U0 828 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 MYCLP1P12525 358 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 SNRPBP14678 240 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 NR1D1P20393 614 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 MPSTP25325 297 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 VARSP26640 1264 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 AK4P27144 223 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 MAP4P27816 1152 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 EPHB2P29323 1055 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 SDC4P31431 198 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 TSPAN7P41732 249 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 PTPN9P43378 593 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 RGRP47804 291 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 UQCRFS1P47985 274 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 MLLT10P55197 1068 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 YBEYP58557 167 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 RAB15P59190 212 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 ILF3Q12906 894 aaKnown RBP eCLIP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 KLRB1Q12918 225 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 SQSTM1Q13501 440 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 DEFB109BQ30KR1 87 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 KRTAP21-3Q3LHN1 58 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 PARP15Q460N3 678 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 CRTC2Q53ET0 693 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 CFAP58Q5T655 872 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 DCAF12Q5T6F0 453 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 ATP1A1-AS1Q5TC04 95 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 NAA35Q5VZE5 725 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 AFMIDQ63HM1 303 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 ANKS6Q68DC2 871 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 PNCKQ6P2M8 343 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 SLC30A9Q6PML9 568 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 DPPA4Q7L190 304 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 STRADAQ7RTN6 431 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 TIPARPQ7Z3E1 657 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 NOP9Q86U38 636 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 HEATR4Q86WZ0 1026 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 FAM129CQ86XR2 697 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 CAMK1DQ8IU85 385 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 UNC5BQ8IZJ1 945 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 NLGN4XQ8N0W4 816 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 NAGSQ8N159 534 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 PYROXD2Q8N2H3 581 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 MSANTD4Q8NCY6 345 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 NLGN4YQ8NFZ3 816 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 JOSD2Q8TAC2 188 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 GPT2Q8TD30 523 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 EPS8L1Q8TE68 723 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 FAM172AQ8WUF8 416 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 APOBEC4Q8WW27 367 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 RXFP2Q8WXD0 754 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 CPA5Q8WXQ8 436 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 STARD8Q92502 1023 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 CENPIQ92674 756 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 NTAN1Q96AB6 310 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 KIAA1143Q96AT1 154 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 ECHDC3Q96DC8 303 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 RTP4Q96DX8 246 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 MOCOSQ96EN8 888 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF641Q96N77 438 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 TEFMQ96QE5 360 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 TUBGCP5Q96RT8 1024 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 GSDMCQ9BYG8 508 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 FRMD8Q9BZ67 464 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 PDCL3Q9H2J4 239 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 ATP13A3Q9H7F0 1226 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 SUDS3Q9H7L9 328 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 GPN2Q9H9Y4 310 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 CARS2Q9HA77 564 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 PDFQ9HBH1 243 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 TRNAU1APQ9NX07 287 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 PDP2Q9P2J9 529 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 UBA2Q9UBT2 640 aaPredicted RBP5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 MOSPD1Q9UJG1 213 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 SRPK3Q9UPE1 567 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 TP53TG5Q9Y2B4 290 aa5.13□□□□□ -1.59
SNRNP40-204ENST00000474025 C2CD3Q4AC94 2353 aa5.12□□□□□ -1.59
SNRNP40-204ENST00000474025 WASH4PA8MWX3 477 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms