RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 IGLV2-14P01704 120 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 FYNP06241 537 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 NHLRC4P0CG21 123 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-212ENST00000473961 CTSAP10619 480 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 VPREB1P12018 145 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 GJA1P17302 382 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 ANXA7P20073 488 aaKnown RBP4.32□□□□□ -1.72
BRCA1-212ENST00000473961 MCCP23508 829 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 DCTDP32321 178 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 ZNF41P51814 821 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-212ENST00000473961 PSMC6P62333 389 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 PKP1Q13835 747 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 SOWAHAQ2M3V2 549 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 SMTNL2Q2TAL5 461 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 CRY2Q49AN0 593 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 PIK3CD-AS1Q5SR53 167 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 DAB2IPQ5VWQ8 1189 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 CST9LP1Q5W188 147 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 SIGIRRQ6IA17 410 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 PLEKHA7Q6IQ23 1121 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 Q6ZPA2 131 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 QSOX2Q6ZRP7 698 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 ANKRD13BQ86YJ7 626 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 SLC35F3Q8IY50 421 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 GPATCH11Q8N954 259 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 BOLLQ8N9W6 283 aaKnown RBP4.32□□□□□ -1.72
BRCA1-212ENST00000473961 TDRD5Q8NAT2 981 aaKnown RBP4.32□□□□□ -1.72
BRCA1-212ENST00000473961 AGBL3Q8NEM8 1001 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 TSPAN14Q8NG11 270 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 CEP76Q8TAP6 659 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 VPS33AQ96AX1 596 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 TMCO6Q96DC7 493 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 VMP1Q96GC9 406 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 CEP295NLQ96MC4 621 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 CFAP57Q96MR6 1250 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 PAFAH2Q99487 392 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 SH3GL2Q99962 352 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 KLHL31Q9H511 634 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 DENND2DQ9H6A0 471 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-212ENST00000473961 GPR108Q9NPR9 543 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 CISD1Q9NZ45 108 aaKnown RBP4.32□□□□□ -1.72
BRCA1-212ENST00000473961 RASAL2Q9UJF2 1139 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 STMND1H3BQB6 276 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 PPP6CO00743 305 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 KLK8O60259 260 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 KRT4P19013 534 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 UBA1P22314 1058 aaKnown RBP4.31□□□□□ -1.72
BRCA1-212ENST00000473961 THPOP40225 353 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 CLCN3P51790 818 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 TMPRSS3P57727 454 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 ZNF91Q05481 1191 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 GRAPQ13588 217 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 ALCAMQ13740 583 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 SCARB2Q14108 478 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 KRT33BQ14525 404 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 PNLIPRP3Q17RR3 467 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 CDONQ4KMG0 1287 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 SGO1Q5FBB7 561 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 COLEC12Q5KU26 742 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 ZNF362Q5T0B9 420 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-212ENST00000473961 DHRS7BQ6IAN0 325 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-212ENST00000473961 C11orf88Q6PI97 169 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 PET117Q6UWS5 81 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 DPPA4Q7L190 304 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 NOXA1Q86UR1 476 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 MB21D2Q8IYB1 491 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-212ENST00000473961 SCYL3Q8IZE3 742 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 TTC30BQ8N4P2 665 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 TEX45Q8NA69 505 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 KDM1BQ8NB78 822 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 OR8K5Q8NH50 307 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 OR14L1PQ8NHC6 308 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 TRPC4APQ8TEL6 797 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 PTERQ96BW5 349 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 SIGLEC11Q96RL6 698 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 RTN4RQ9BZR6 473 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 NPFFR1Q9GZQ6 430 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 TKTL2Q9H0I9 626 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 MMP27Q9H306 513 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 MAGIXQ9H6Y5 334 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 WSB2Q9NYS7 404 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-212ENST00000473961 DDX25Q9UHL0 483 aaKnown RBP4.31□□□□□ -1.72
BRCA1-212ENST00000473961 ZNHIT2Q9UHR6 403 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 ZNF148Q9UQR1 794 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 NFE2L3Q9Y4A8 694 aa4.31□□□□□ -1.72
BRCA1-212ENST00000473961 SOS1Q07889 1333 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 H3BQ06 376 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 MAP2K7O14733 419 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 MDM4O15151 490 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 PAPSS1O43252 624 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 RGS11O94810 467 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 CLDN7O95471 211 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 ERCC2P18074 760 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 TRIM21P19474 475 aaKnown RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 CPT2P23786 658 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 ATP5F1P24539 256 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 KCNJ4P48050 445 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 METAP2P50579 478 aaKnown RBP eCLIP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 GPR143P51810 404 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 CSE1LP55060 971 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms