RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 RARS2Q5T160 578 aaKnown RBP17.98■□□□□ 0.47
VARS2-206ENST00000473916 DPY19L3Q6ZPD9 716 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 TBC1D1Q86TI0 1168 aaPredicted RBP17.98■□□□□ 0.47
VARS2-206ENST00000473916 CRLF3Q8IUI8 442 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 NPAS3Q8IXF0 933 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 CHST14Q8NCH0 376 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 NAT14Q8WUY8 206 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 LPGAT1Q92604 370 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 GATA5Q9BWX5 397 aaPredicted RBP17.98■□□□□ 0.47
VARS2-206ENST00000473916 GPR63Q9BZJ6 419 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 ATP13A3Q9H7F0 1226 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 OXSMQ9NWU1 459 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.98■□□□□ 0.47
VARS2-206ENST00000473916 SOBPA7XYQ1 873 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 DLX3O60479 287 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 POU2F2P09086 479 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 FMO4P31512 558 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 HNF1BP35680 557 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 CCNHP51946 323 aaPredicted RBP17.98■□□□□ 0.47
VARS2-206ENST00000473916 ABCE1P61221 599 aaKnown RBP17.98■□□□□ 0.47
VARS2-206ENST00000473916 SLC20A2Q08357 652 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 MYLK3Q32MK0 819 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 ZRANB3Q5FWF4 1079 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 ELMSAN1Q6PJG2 1045 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 TSPAN33Q86UF1 283 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 ALYREFQ86V81 257 aaKnown RBP17.98■□□□□ 0.47
VARS2-206ENST00000473916 LRRC37BQ96QE4 947 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 MTG2Q9H4K7 406 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 ZDHHC6Q9H6R6 413 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 MAGEE1Q9HCI5 957 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 DUS2Q9NX74 493 aaKnown RBP17.98■□□□□ 0.47
VARS2-206ENST00000473916 HEY2Q9UBP5 337 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 DPP7Q9UHL4 492 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 SLC25A13Q9UJS0 675 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 MED16Q9Y2X0 877 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 A0A0J9YYE9 177 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 C1orf232A0A0U1RR37 186 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.97■□□□□ 0.47
VARS2-206ENST00000473916 GOLGA8CPA6NN73 597 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 TRIM13O60858 407 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 CLDN7O95471 211 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 TRBC1P01850 177 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 ARSAP15289 507 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 TCF3P15923 654 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 KCNA5P22460 613 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 SERPINB3P29508 390 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 AQP5P55064 265 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 SNRPD1P62314 119 aaKnown RBP17.97■□□□□ 0.47
VARS2-206ENST00000473916 XIAPP98170 497 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 BNIP1Q12981 228 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 CDKN3Q16667 212 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 MAVSQ7Z434 540 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 SDCCAG8Q86SQ7 713 aaPredicted RBP17.97■□□□□ 0.47
VARS2-206ENST00000473916 TTC7BQ86TV6 843 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 C10orf67Q8IYJ2 551 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 CELF5Q8N6W0 485 aaKnown RBP17.97■□□□□ 0.47
VARS2-206ENST00000473916 TTC8Q8TAM2 541 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 ZNF398Q8TD17 642 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 UBXN10Q96LJ8 280 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 EBF4Q9BQW3 602 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 AARSD1Q9BTE6 412 aaKnown RBP17.97■□□□□ 0.47
VARS2-206ENST00000473916 GALPQ9UBC7 116 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 TRIM33Q9UPN9 1127 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 ANKRD12Q6UB98 2062 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 DOCK8Q8NF50 2099 aa17.97■□□□□ 0.47
VARS2-206ENST00000473916 OTOL1A6NHN0 477 aaPredicted RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 NPIPB15A6NHN6 443 aaPredicted RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 CHRNGP07510 517 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 GRK2P25098 689 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 HMGCLP35914 325 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 SETMARQ53H47 684 aaPredicted RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 TECRLQ5HYJ1 363 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 FAM45BPQ6NSW5 357 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 FAM151BQ6UXP7 276 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 TXNDC5Q8NBS9 432 aaKnown RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 FAM45AQ8TCE6 357 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 AGR3Q8TD06 166 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 TSPAN17Q96FV3 270 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 HACD3Q9P035 362 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 MARK1Q9P0L2 795 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 CAPN7Q9Y6W3 813 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 KIF26AQ9ULI4 1882 aaPredicted RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 SPTBN5Q9NRC6 3674 aaKnown RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 GAPDHSO14556 408 aaPredicted RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 LINC01565O15544 149 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 SOCS5O75159 536 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 FSBPO95073 299 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 UGT2B4P06133 528 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 APOA4P06727 396 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 LTA4HP09960 611 aaKnown RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 SERPINA4P29622 427 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 KCNC1P48547 511 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 NCALDP61601 193 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 CCDC15Q0P6D6 951 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 EML3Q32P44 896 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 GET4Q7L5D6 327 aaPredicted RBP17.96■□□□□ 0.47
VARS2-206ENST00000473916 GRIN3AQ8TCU5 1115 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 FGF13Q92913 245 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 BIRC8Q96P09 236 aa17.96■□□□□ 0.47
VARS2-206ENST00000473916 MRPL46Q9H2W6 279 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms