RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TMEM63BQ5T3F8 832 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 FAM205BPQ63HN1 556 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ARMC6Q6NXE6 501 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 DENND1BQ6P3S1 775 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 BBS12Q6ZW61 710 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 TMTC3Q6ZXV5 915 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ENOSF1Q7L5Y1 443 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 RASGRP2Q7LDG7 609 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 C17orf53Q8N3J3 647 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 CPEB3Q8NE35 698 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 TNIP2Q8NFZ5 429 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ZCCHC10Q8TBK6 192 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ADAMTS14Q8WXS8 1223 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 WASF1Q92558 559 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 CASP10Q92851 521 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 FKBP10Q96AY3 582 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 SH3KBP1Q96B97 665 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 SAAL1Q96ER3 474 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 MED8Q96G25 268 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 CALML4Q96GE6 196 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 TREX2Q9BQ50 279 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 CENPOQ9BU64 300 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 AP1M1Q9BXS5 423 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 TRIM31Q9BZY9 425 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 AMBRA1Q9C0C7 1298 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 SLC25A18Q9H1K4 315 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 PRDM13Q9H4Q3 707 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 PRKRIP1Q9H875 184 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 LTB4R2Q9NPC1 389 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 AKIP1Q9NQ31 210 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 SEPT11Q9NVA2 429 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 HOXC10Q9NYD6 342 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 IL1RAPL1Q9NZN1 696 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ADD3Q9UEY8 706 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 RPS6KA6Q9UK32 745 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ZNF215Q9UL58 517 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 RIMKLBQ9ULI2 386 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 NOL7Q9UMY1 257 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 FRMD4BQ9Y2L6 1034 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 Q9Y3F1 56 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 MTF2Q9Y483 593 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 HEMK1Q9Y5R4 338 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 FNDC1Q4ZHG4 1894 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 MED13Q9UHV7 2174 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 HIVEP3Q5T1R4 2406 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 LRBAP50851 2863 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 SPTBN1Q01082 2364 aaKnown RBP2.46□□□□□ -2.01
CALD1-216ENST00000473714 GOLGA4Q13439 2230 aaKnown RBP2.46□□□□□ -2.01
CALD1-216ENST00000473714 ADGRA3Q8IWK6 1321 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 TEX13CA0A0J9YWL9 993 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 SPAARA0A1B0GVQ0 90 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 GAGE12BA1L429 117 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 GAGE12HA6NDE8 117 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 SH2D7A6NKC9 451 aaPredicted RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 EIF3CLB5ME19 914 aaKnown RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 CDX4O14627 284 aaPredicted RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 TRIM24O15164 1050 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 CTIFO43310 598 aaKnown RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 PEX1O43933 1283 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 TMPRSS11DO60235 418 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 DOK2O60496 412 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 USO1O60763 962 aaKnown RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 DIAPH2O60879 1101 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 TMEM63AO94886 807 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 NXPH3O95157 252 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 ZFPL1O95159 310 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 SLC25A27O95847 323 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 SCGB1D1O95968 90 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 CFIP05156 583 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 APOA4P06727 396 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 CHRM2P08172 466 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 TMIGD3P0DMS9 266 aaPredicted RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 NR2F6P10588 404 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 UBL4AP11441 157 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 CHN1P15882 459 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 PPP3CBP16298 524 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 NDUFB7P17568 137 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 ADRA1DP25100 572 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 GSTM2P28161 218 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 PRKAR2BP31323 418 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 SLC8A1P32418 973 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 MPLP40238 635 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 EIF2S3P41091 472 aaKnown RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 LMAN1P49257 510 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 NXPH1P58417 271 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 RPS3AP61247 264 aaKnown RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 RPL15P61313 204 aaKnown RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 TIAL1Q01085 375 aaKnown RBP eCLIP2.46□□□□□ -2.02
CALD1-216ENST00000473714 MC1RQ01726 317 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 SP2Q02086 613 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 GUCY1B3Q02153 619 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 MTAPQ13126 283 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 HNRNPDQ14103 355 aaKnown RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 COG2Q14746 738 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 PLCB4Q15147 1175 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 PTPN14Q15678 1187 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 TBCEQ15813 527 aaPredicted RBP2.46□□□□□ -2.02
CALD1-216ENST00000473714 CYP2A13Q16696 494 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 CCDC96Q2M329 555 aa2.46□□□□□ -2.02
CALD1-216ENST00000473714 TIGD2Q4W5G0 525 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms