RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ZNF28P17035 718 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SOX5P35711 763 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 ADCY8P40145 1251 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 STAT1P42224 750 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 CSNK1DP48730 415 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 ZNF143P52747 638 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SLC10A7Q0GE19 358 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 CDC20Q12834 499 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 TRAF2Q12933 501 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SQSTM1Q13501 440 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 ACOX1Q15067 660 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 FAM182AQ5T1J6 154 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 ERAP2Q6P179 960 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 Q6ZVL8 140 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 PHF13Q86YI8 300 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-223ENST00000473345 IL22RA1Q8N6P7 574 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 ZSCAN1Q8NBB4 408 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 OR4D9Q8NGE8 314 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SCARF2Q96GP6 870 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SLC45A3Q96JT2 553 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 MCEEQ96PE7 176 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 KCTD15Q96SI1 283 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-223ENST00000473345 VPS16Q9H269 839 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 ETNK2Q9NVF9 386 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SLC39A1Q9NY26 324 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SLC17A4Q9Y2C5 497 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 SIK3Q9Y2K2 1263 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 PCDHGC4Q9Y5F7 938 aa9.6□□□□□ -0.87
MCF2L-223ENST00000473345 TEX15Q9BXT5 2789 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 A8MU76 341 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 B4E171 279 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 HTRA2O43464 458 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-223ENST00000473345 DLGAP3O95886 979 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 TCF4P15884 667 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 TSPAN7P41732 249 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 CCR10P46092 362 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 SCNN1BP51168 640 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 MLLT10P55197 1068 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 POLR2FP61218 127 aaKnown RBP9.59□□□□□ -0.87
MCF2L-223ENST00000473345 DEFB109BQ30KR1 87 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 DENND2CQ68D51 928 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 DOK6Q6PKX4 331 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 ARHGAP22Q7Z5H3 698 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 TECPR1Q7Z6L1 1165 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 C3orf20Q8ND61 904 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 C9orf43Q8TAL5 461 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-223ENST00000473345 SLC37A2Q8TED4 501 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 NUS1Q96E22 293 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 DTD2Q96FN9 168 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 SYT11Q9BT88 431 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 DDA1Q9BW61 102 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 FAM207AQ9NSI2 230 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-223ENST00000473345 TRNAU1APQ9NX07 287 aaKnown RBP9.59□□□□□ -0.87
MCF2L-223ENST00000473345 ADAM22Q9P0K1 906 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 CD84Q9UIB8 345 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 TUBD1Q9UJT1 453 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 TP53TG5Q9Y2B4 290 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 PRKAB1Q9Y478 270 aa9.59□□□□□ -0.87
MCF2L-223ENST00000473345 USP9YO00507 2555 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-223ENST00000473345 USP9XQ93008 2570 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-223ENST00000473345 PRR19A6NJB7 356 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 ZNF891A8MT65 544 aaPredicted RBP9.58□□□□□ -0.88
MCF2L-223ENST00000473345 ATMINO43313 823 aaPredicted RBP9.58□□□□□ -0.88
MCF2L-223ENST00000473345 PALMO75781 387 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 PDHA1P08559 390 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 CTPS1P17812 591 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 ERCC2P18074 760 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 SERPINA4P29622 427 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 ACTR1BP42025 376 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 CD97P48960 835 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 ATP1A2P50993 1020 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 NDST2P52849 883 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 TPI1P60174 286 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 ACTR1AP61163 376 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 MAXP61244 160 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 BCL2L1Q07817 233 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 TCP11X2Q5H9J9 407 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 SNAP47Q5SQN1 464 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.58□□□□□ -0.88
MCF2L-223ENST00000473345 TMEM71Q6P5X7 295 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 FAM129CQ86XR2 697 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 ZNF677Q86XU0 584 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 MLKLQ8NB16 471 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 AGBL5Q8NDL9 886 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 ATL2Q8NHH9 583 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 KIAA1524Q8TCG1 905 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 SPOCK2Q92563 424 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 SCAMP4Q969E2 229 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 WDR24Q96S15 920 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 SNRNP25Q9BV90 132 aaKnown RBP9.58□□□□□ -0.88
MCF2L-223ENST00000473345 SELENOOQ9BVL4 669 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 GSDMCQ9BYG8 508 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 ATP13A3Q9H7F0 1226 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 NOD2Q9HC29 1040 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 SIDT1Q9NXL6 827 aaKnown RBP9.58□□□□□ -0.88
MCF2L-223ENST00000473345 KCNK4Q9NYG8 393 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 OGFRQ9NZT2 677 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 TMEM63CQ9P1W3 806 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 AP4E1Q9UPM8 1137 aa9.58□□□□□ -0.88
MCF2L-223ENST00000473345 OAS3Q9Y6K5 1087 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms