RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 TRPV5Q9NQA5 729 aa12.59□□□□□ -0.39
PCCB-211ENST00000473073 CATSPERZQ9NTU4 200 aa12.59□□□□□ -0.39
PCCB-211ENST00000473073 MTO1Q9Y2Z2 717 aaKnown RBP12.59□□□□□ -0.39
PCCB-211ENST00000473073 PPIL1Q9Y3C6 166 aa12.59□□□□□ -0.39
PCCB-211ENST00000473073 TMEM120BA0PK00 339 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 TPP1O14773 563 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 CD3EAPO15446 510 aaKnown RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 RFPL1O75677 317 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 ALDOAP04075 364 aaKnown RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 BPIP17213 487 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 XPAP23025 273 aaPredicted RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 CA5AP35218 305 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 SERPINB9P50453 376 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 LIMK2P53671 638 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 POLR2LP62875 67 aaKnown RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 TDGQ13569 410 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 ZRANB3Q5FWF4 1079 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 GRTP1Q5TC63 336 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 KDM7AQ6ZMT4 941 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 ZC3HC1Q86WB0 502 aaKnown RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 PIANPQ8IYJ0 282 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 IL17RCQ8NAC3 791 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 MAFAQ8NHW3 353 aaPredicted RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 PEX13Q92968 403 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 SMC6Q96SB8 1091 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 NDNQ99608 321 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 SLC6A17Q9H1V8 727 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 PCMTD2Q9NV79 361 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 CD84Q9UIB8 345 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 F5P12259 2224 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 GAPDHSO14556 408 aaPredicted RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 ADAM23O75077 832 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 KLF8O95600 359 aaPredicted RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 C1SP09871 688 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 FOXN2P32314 431 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 SPRP35270 261 aaPredicted RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 XIAPP98170 497 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 PDE1BQ01064 536 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 GRSF1Q12849 480 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCCB-211ENST00000473073 ENPP2Q13822 863 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 RBM20Q5T481 1227 aaKnown RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 LGSNQ5TDP6 509 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 ARMC3Q5W041 872 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 AFTPHQ6ULP2 937 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 SUGP1Q8IWZ8 645 aaKnown RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 GPATCH11Q8N954 259 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 TXNDC5Q8NBS9 432 aaKnown RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 GPR26Q8NDV2 337 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 CALML6Q8TD86 181 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 NAT14Q8WUY8 206 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 PBXIP1Q96AQ6 731 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 LRIG1Q96JA1 1093 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 LYSMD1Q96S90 227 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 C8orf33Q9H7E9 229 aaPredicted RBP12.58□□□□□ -0.4
PCCB-211ENST00000473073 SUN2Q9UH99 717 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 CRYL1Q9Y2S2 319 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 MUC3AQ02505 3323 aa12.58□□□□□ -0.4
PCCB-211ENST00000473073 LOC730098B7Z3J9 87 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 SPINT1O43278 529 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 PRAMEF1O95521 474 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 S1PR4O95977 384 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 SRFP11831 508 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 COL9A1P20849 921 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 ITGB7P26010 798 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 HADHAP40939 763 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 CD151P48509 253 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 CSE1LP55060 971 aaKnown RBP12.57□□□□□ -0.4
PCCB-211ENST00000473073 GUCY1A3Q02108 690 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 ZNF460Q14592 562 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 LRRC14Q15048 493 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 SLC44A4Q53GD3 710 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 FASTKD1Q53R41 847 aaKnown RBP12.57□□□□□ -0.4
PCCB-211ENST00000473073 PPM1JQ5JR12 505 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 SH2D5Q6ZV89 423 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 SLC41A1Q8IVJ1 513 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 NDUFAF2Q8N183 169 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 TMIEQ8NEW7 156 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 CCDC97Q96F63 343 aaPredicted RBP12.57□□□□□ -0.4
PCCB-211ENST00000473073 WRAP53Q9BUR4 548 aaKnown RBP12.57□□□□□ -0.4
PCCB-211ENST00000473073 SLC13A1Q9BZW2 595 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 RHOJQ9H4E5 214 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 SNX15Q9NRS6 342 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 NSMCE4AQ9NXX6 385 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 DKK3Q9UBP4 350 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 ADAM21Q9UKJ8 722 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 SLC39A10Q9ULF5 831 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 CA14Q9ULX7 337 aa12.57□□□□□ -0.4
PCCB-211ENST00000473073 NDRG2Q9UN36 371 aaKnown RBP12.57□□□□□ -0.4
PCCB-211ENST00000473073 CKAP5Q14008 2032 aa12.56□□□□□ -0.4
PCCB-211ENST00000473073 ZNF106Q9H2Y7 1883 aaKnown RBP12.56□□□□□ -0.4
PCCB-211ENST00000473073 A0A1W2PQ67 120 aa12.56□□□□□ -0.4
PCCB-211ENST00000473073 MID1O15344 667 aa12.56□□□□□ -0.4
PCCB-211ENST00000473073 SYNCRIPO60506 623 aaKnown RBP12.56□□□□□ -0.4
PCCB-211ENST00000473073 CHN1P15882 459 aa12.56□□□□□ -0.4
PCCB-211ENST00000473073 PSMA3P25788 255 aa12.56□□□□□ -0.4
PCCB-211ENST00000473073 CNTFP26441 200 aa12.56□□□□□ -0.4
PCCB-211ENST00000473073 NTSR1P30989 418 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms