RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 GOT1P17174 413 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CKMT2P17540 419 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 C5AR1P21730 350 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CMA1P23946 247 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 PRKCHP24723 683 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CD38P28907 300 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 HLA-FP30511 346 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 ACADSBP45954 432 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 GCLMP48507 274 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CASP4P49662 377 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CSNK1EP49674 416 aaKnown RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 DUSP3P51452 185 aaPredicted RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 GYS2P54840 703 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 TMPRSS3P57727 454 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 RPS14P62263 151 aaKnown RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 FAM193AP78312 1265 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 KRT85P78386 507 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 SLC6A3Q01959 620 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 RHDQ02161 417 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 LRRC63Q05C16 580 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 ADIGQ0VDE8 80 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CUL4BQ13620 913 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 PCOLCEQ15113 449 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CST6Q15828 149 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 GOLGA7BQ2TAP0 167 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 SOWAHCQ53LP3 525 aaPredicted RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 RABGAP1LQ5R372 815 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 KIAA0895LQ68EN5 471 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 PM20D1Q6GTS8 502 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 NAPEPLDQ6IQ20 393 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 TCTN3Q6NUS6 607 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 MSANTD2Q6P1R3 559 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CRIP3Q6Q6R5 217 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 C19orf48Q6RUI8 117 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 SHC4Q6S5L8 630 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 DHRS13Q6UX07 377 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CHST9Q7L1S5 443 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 BEND5Q7L4P6 421 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 GPRIN1Q7Z2K8 1008 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 PRPF39Q86UA1 669 aaKnown RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 CACUL1Q86Y37 369 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 GUF1Q8N442 669 aaKnown RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 PNPLA1Q8N8W4 532 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 KIAA0895Q8NCT3 520 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 HIPK4Q8NE63 616 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 OR2I1PQ8NGU4 316 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 PPP1R14CQ8TAE6 165 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 TAS1R2Q8TE23 839 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 RFFLQ8WZ73 363 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 FGF11Q92914 225 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 BIRC7Q96CA5 298 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 NEIL1Q96FI4 390 aaPredicted RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 PPP1R16AQ96I34 528 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 SERAC1Q96JX3 654 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 HSFY1Q96LI6 401 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 ZNF578Q96N58 590 aaPredicted RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 CAMK1GQ96NX5 476 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 LGMNQ99538 433 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 KCTD10Q9H3F6 313 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 C6orf106Q9H6K1 298 aaPredicted RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 SEC61A2Q9H9S3 476 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 NMUR1Q9HB89 426 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 METTL14Q9HCE5 456 aaKnown RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 PREBQ9HCU5 417 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 FSCN3Q9NQT6 498 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 ACSS2Q9NR19 701 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 DYRK4Q9NR20 520 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 THSD1Q9NS62 852 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 CISHQ9NSE2 258 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 ABCB8Q9NUT2 735 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 SPTLC3Q9NUV7 552 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 OSER1Q9NX31 292 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 RAB20Q9NX57 234 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 FBXL12Q9NXK8 326 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 HECAQ9UBI9 543 aaPredicted RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 HMGXB4Q9UGU5 601 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 SLC25A13Q9UJS0 675 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 ING1Q9UK53 422 aaPredicted RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 RALYQ9UKM9 306 aaKnown RBP3.6□□□□□ -1.83
XRN1-209ENST00000472625 TSPAN16Q9UKR8 245 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.6□□□□□ -1.83
XRN1-209ENST00000472625 CLCA2Q9UQC9 943 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 TCAF1Q9Y4C2 921 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 NME7Q9Y5B8 376 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 ITIH6Q6UXX5 1313 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 AKAP13Q12802 2813 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 DENND4CQ5VZ89 1909 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 NUP205Q92621 2012 aa3.6□□□□□ -1.83
XRN1-209ENST00000472625 SDK1Q7Z5N4 2213 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 CACNA1EQ15878 2313 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TNRC6BQ9UPQ9 1833 aaKnown RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 CXorf51AA0A1B0GTR3 108 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 A0A1B0GVM2 712 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 UBA6A0AVT1 1052 aaPredicted RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 FAM47DPA6NHR8 397 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 WASH3PC4AMC7 463 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 F5H5T6 163 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 PRAMEF26H0Y7S4 382 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 M0QYV0 167 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TLR4O00206 839 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms