RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 EPHB1P54762 984 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 SPIDRQ14159 915 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 RAET1GQ6H3X3 334 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 Q6ZVL8 140 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 SDR16C5Q8N3Y7 309 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 CCNYQ8ND76 341 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 PIH1D2Q8WWB5 315 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 ATXN7L3BQ96GX2 97 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 MCCC1Q96RQ3 725 aaPredicted RBP15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 TMEM168Q9H0V1 697 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 HAUS2Q9NVX0 235 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 CD84Q9UIB8 345 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 RABGEF1Q9UJ41 708 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 SATB2Q9UPW6 733 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 ENTPD2Q9Y5L3 495 aa15.71■□□□□ 0.11
CCDC88B-205ENST00000472524 PRSS38A1L453 326 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 LRRD1A4D1F6 860 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 PMS2P1A4D2B8 440 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 B4DGG1 531 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 PSMD11O00231 422 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 PDE2AO00408 941 aaPredicted RBP15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 TNFRSF10CO14798 259 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 KLK10O43240 276 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 TCEA3O75764 348 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 HLA-DQB2P05538 268 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 PLA2G2AP14555 144 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 CCNB1P14635 433 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 MX2P20592 715 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 TMPRSS3P57727 454 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 ERVPABLB-1P60509 514 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 SLC10A2Q12908 348 aaPredicted RBP15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 ARHGAP40Q5TG30 622 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 LRRC66Q68CR7 880 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 RFLNAQ6ZTI6 216 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 NDUFAF2Q8N183 169 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 FAM46DQ8NEK8 389 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 CCL4L1Q8NHW4 92 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 KCNE4Q8WWG9 221 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 ZNF830Q96NB3 372 aaPredicted RBP15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 TSGA13Q96PP4 275 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 RNF157Q96PX1 679 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 CARS2Q9HA77 564 aaKnown RBP15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 KCTD5Q9NXV2 234 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 DTLQ9NZJ0 730 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 CHKBQ9Y259 395 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 ATMQ13315 3056 aa15.7■□□□□ 0.1
CCDC88B-205ENST00000472524 SETXQ7Z333 2677 aaKnown RBP15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 A0A0J9YYE9 177 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 FZD6O60353 706 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 TRBC1P01850 177 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 KRT1P04264 644 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 KRT10P13645 584 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 TNNT1P13805 278 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 CDK3Q00526 305 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 CFHR1Q03591 330 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 NIPAL4Q0D2K0 466 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 IHHQ14623 411 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 BROXQ5VW32 411 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 ALG1LQ6GMV1 187 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 FOXR1Q6PIV2 292 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 SFTPA2Q8IWL1 248 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 RHOT2Q8IXI1 618 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 CCDC13Q8IYE1 715 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 CBARPQ8N350 705 aaPredicted RBP15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 GPR156Q8NFN8 814 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 WDR48Q8TAF3 677 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 FATE1Q969F0 183 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 HDAC11Q96DB2 347 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 TDRD1Q9BXT4 1180 aaKnown RBP15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 TEX101Q9BY14 249 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 DPEP2Q9H4A9 486 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 THSD1Q9NS62 852 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 AMACRQ9UHK6 382 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 PPIL1Q9Y3C6 166 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 HEY1Q9Y5J3 304 aa15.69■□□□□ 0.1
CCDC88B-205ENST00000472524 AKR1B15C9JRZ8 316 aaPredicted RBP15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 ERVH48-1M5A8F1 160 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 KCNK1O00180 336 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 JCHAINP01591 159 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 RPLP0P05388 317 aaKnown RBP15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 CA4P22748 312 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 CES1P23141 567 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 ARHGAP25P42331 645 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 GPR1P46091 355 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 GNPDA1P46926 289 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 PDX1P52945 283 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 CCL7P80098 99 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 TAF1BQ53T94 588 aaPredicted RBP15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 ODF2Q5BJF6 829 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 FAM182AQ5T1J6 154 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 DOK6Q6PKX4 331 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 TECPR1Q7Z6L1 1165 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 ZNF605Q86T29 641 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 CNGA4Q8IV77 575 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 PLD5Q8N7P1 536 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 LPCAT1Q8NF37 534 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 ARRDC2Q8TBH0 407 aa15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 PRR11Q96HE9 360 aaPredicted RBP15.68■□□□□ 0.1
CCDC88B-205ENST00000472524 SLC46A1Q96NT5 459 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms