RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 SYNDIG1Q9H7V2 258 aa14.89□□□□□ -0.03
HOXB3-206ENST00000471459 CARS2Q9HA77 564 aaKnown RBP14.89□□□□□ -0.03
HOXB3-206ENST00000471459 FGF22Q9HCT0 170 aa14.89□□□□□ -0.03
HOXB3-206ENST00000471459 LHX6Q9UPM6 363 aa14.89□□□□□ -0.03
HOXB3-206ENST00000471459 PCDHA13Q9Y5I0 950 aa14.89□□□□□ -0.03
HOXB3-206ENST00000471459 ALG6Q9Y672 507 aa14.89□□□□□ -0.03
HOXB3-206ENST00000471459 TDRD6O60522 2096 aaKnown RBP14.88□□□□□ -0.03
HOXB3-206ENST00000471459 CAPN8A6NHC0 703 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 C3orf70A6NLC5 250 aaPredicted RBP14.88□□□□□ -0.03
HOXB3-206ENST00000471459 TMX2-CTNND1H3BSU7 103 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 MTSS1O43312 755 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 PSTPIP1O43586 416 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 HLA-DQB2P05538 268 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 CELA2BP08218 269 aaPredicted RBP14.88□□□□□ -0.03
HOXB3-206ENST00000471459 GM2AP17900 193 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 TGM2P21980 687 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 LHCGRP22888 699 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 CD86P42081 329 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 NAP1L1P55209 391 aaKnown RBP14.88□□□□□ -0.03
HOXB3-206ENST00000471459 IFI35P80217 286 aaPredicted RBP14.88□□□□□ -0.03
HOXB3-206ENST00000471459 PTSQ03393 145 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 NIPAL4Q0D2K0 466 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 ISXQ2M1V0 245 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 ZNF765Q7L2R6 523 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 TECPR1Q7Z6L1 1165 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 TSPAN33Q86UF1 283 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 NT5DC3Q86UY8 548 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 EXD1Q8NHP7 514 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 LRRN4Q8WUT4 740 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 HNRNPLLQ8WVV9 542 aaKnown RBP14.88□□□□□ -0.03
HOXB3-206ENST00000471459 MRFAP1L1Q96HT8 127 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 DCBLD2Q96PD2 775 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 PANX2Q96RD6 677 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 TMEM168Q9H0V1 697 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 MRPL40Q9NQ50 206 aaKnown RBP14.88□□□□□ -0.03
HOXB3-206ENST00000471459 HYOU1Q9Y4L1 999 aa14.88□□□□□ -0.03
HOXB3-206ENST00000471459 PTPRBP23467 1997 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 A0A0A6YYK5 440 aaPredicted RBP14.87□□□□□ -0.03
HOXB3-206ENST00000471459 RGSL1A5PLK6 1076 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 ANKRD66B4E2M5 251 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 LCA5LO95447 670 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 RBMS1P29558 406 aaKnown RBP14.87□□□□□ -0.03
HOXB3-206ENST00000471459 CETN2P41208 172 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 LSSP48449 732 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 ZNF75DP51815 510 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 CDK3Q00526 305 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 TFDP3Q5H9I0 405 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 PERM1Q5SV97 790 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 KAZNQ674X7 775 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 C19orf48Q6RUI8 117 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 MFSD7Q6UXD7 560 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 ADAMTSL4Q6UY14 1074 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 DAAM2Q86T65 1068 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 CCDC50Q8IVM0 306 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 KYQ8NBH2 561 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 P3H4Q92791 437 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 HIC2Q96JB3 615 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 ZNF578Q96N58 590 aaPredicted RBP14.87□□□□□ -0.03
HOXB3-206ENST00000471459 AGAP3Q96P47 875 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 GFM1Q96RP9 751 aaKnown RBP14.87□□□□□ -0.03
HOXB3-206ENST00000471459 SRPK1Q96SB4 655 aaKnown RBP14.87□□□□□ -0.03
HOXB3-206ENST00000471459 FERMT1Q9BQL6 677 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 ABCG8Q9H221 673 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 SUDS3Q9H7L9 328 aaPredicted RBP14.87□□□□□ -0.03
HOXB3-206ENST00000471459 POLR1BQ9H9Y6 1135 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 TRNAU1APQ9NX07 287 aaKnown RBP14.87□□□□□ -0.03
HOXB3-206ENST00000471459 PKD2L2Q9NZM6 624 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 CD84Q9UIB8 345 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 GPSM3Q9Y4H4 160 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 EPN1Q9Y6I3 576 aaPredicted RBP14.87□□□□□ -0.03
HOXB3-206ENST00000471459 PLXNB3Q9ULL4 1909 aa14.87□□□□□ -0.03
HOXB3-206ENST00000471459 A0A087WV48 116 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 C1orf232A0A0U1RR37 186 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 BRINP1O60477 761 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 CST8O60676 142 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 CLDN7O95471 211 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 ASMTLO95671 621 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 CEACAM5P06731 702 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 GLB1P16278 677 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 CDKN2BP42772 138 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 GNPDA1P46926 289 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 STC1P52823 247 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 GABREP78334 506 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 SKOR1P84550 965 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 PTPRRQ15256 657 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 CCDC181Q5TID7 509 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 OGFOD3Q6PK18 319 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 TXLNBQ8N3L3 684 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 GPR156Q8NFN8 814 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 TFB1MQ8WVM0 346 aaKnown RBP14.86□□□□□ -0.03
HOXB3-206ENST00000471459 CCDC74AQ96AQ1 378 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 RBM41Q96IZ5 413 aaKnown RBP14.86□□□□□ -0.03
HOXB3-206ENST00000471459 LYSMD1Q96S90 227 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 STRADBQ9C0K7 418 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 CDH19Q9H159 772 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 SLC25A51Q9H1U9 297 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 FAM83DQ9H4H8 585 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 RAD18Q9NS91 495 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 PCDHB1Q9Y5F3 818 aa14.86□□□□□ -0.03
HOXB3-206ENST00000471459 B4DGG1 531 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms