RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ALPIP09923 528 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 CCKBRP32239 447 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 HCAR3P49019 387 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 SUOXP51687 545 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 HK3P52790 923 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 DPYSL3Q14195 570 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 AGERQ15109 404 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 IRF4Q15306 451 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 ELOCQ15369 112 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 CA9Q16790 459 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 PPP6R3Q5H9R7 873 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-206ENST00000471037 FAXCQ5TGI0 409 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 FAM72AQ5TYM5 149 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 FAM72DQ6L9T8 149 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 FOXR1Q6PIV2 292 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 XKR5Q6UX68 686 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 MFSD7Q6UXD7 560 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 TTC7BQ86TV6 843 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 FAM72BQ86X60 149 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 SLC13A5Q86YT5 568 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-206ENST00000471037 CREG2Q8IUH2 290 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 KYQ8NBH2 561 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 OR6C4Q8NGE1 309 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 CXorf40AQ8TE69 158 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 SCG3Q8WXD2 468 aaKnown RBP9.12□□□□□ -0.95
SF3A1-206ENST00000471037 FAF2Q96CS3 445 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 KCTD15Q96SI1 283 aaPredicted RBP9.12□□□□□ -0.95
SF3A1-206ENST00000471037 GPATCH2LQ9NWQ4 482 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 HPCAL4Q9UM19 191 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 RP1P56715 2156 aa9.12□□□□□ -0.95
SF3A1-206ENST00000471037 A0A1W2PQM1 296 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 TSPAN11A1L157 253 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 EFSO43281 561 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 KDELR3O43731 214 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 NOBOXO60393 691 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 TMCC1O94876 653 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 RASGRP1O95267 797 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 WISP1O95388 367 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 IGSF6O95976 241 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 FGGP02679 453 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 ITGB2P05107 769 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 CELA2BP08218 269 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 CD48P09326 243 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 ZFXP17010 805 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 SLC5A2P31639 672 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 UGT1A5P35504 534 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 TPI1P60174 286 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 KCNC4Q03721 635 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 RAD51Q06609 339 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 ELP6Q0PNE2 266 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 TFDP2Q14188 446 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 LONRF2Q1L5Z9 754 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 ALG11Q2TAA5 492 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 TMEM52BQ4KMG9 183 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 INO80DQ53TQ3 878 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 LRRC73Q5JTD7 316 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 ATXN7L2Q5T6C5 722 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 RWDD4Q6NW29 188 aaKnown RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 RAB11FIP2Q7L804 512 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 ZNF572Q7Z3I7 529 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 B3GNT8Q7Z7M8 397 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 PYROXD2Q8N2H3 581 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 FBXO39Q8N4B4 442 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 CEP112Q8N8E3 955 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 MNS1Q8NEH6 495 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 PCDH19Q8TAB3 1148 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 HCAR2Q8TDS4 363 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 CCDC74AQ96AQ1 378 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 TBC1D31Q96DN5 1066 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 MS4A14Q96JA4 679 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 CAPZA3Q96KX2 299 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 CSPG4P5Q96PW8 444 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 RNF157Q96PX1 679 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 GFM1Q96RP9 751 aaKnown RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 MAK16Q9BXY0 300 aaKnown RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 CPEB1Q9BZB8 566 aaKnown RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 STRADBQ9C0K7 418 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 SYNDIG1Q9H7V2 258 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 EPB41L5Q9HCM4 733 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 DONSONQ9NYP3 566 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 CWC15Q9P013 229 aaKnown RBP9.11□□□□□ -0.95
SF3A1-206ENST00000471037 RABGEF1Q9UJ41 708 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 DOLKQ9UPQ8 538 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 MAST4O15021 2626 aa9.11□□□□□ -0.95
SF3A1-206ENST00000471037 LRP4O75096 1905 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 GOLGA6L10A0A0M3HER8 536 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 NVLO15381 856 aaKnown RBP9.1□□□□□ -0.95
SF3A1-206ENST00000471037 FGF10O15520 208 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-206ENST00000471037 CREB3O43889 395 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 RPLP0P05388 317 aaKnown RBP9.1□□□□□ -0.95
SF3A1-206ENST00000471037 LIPCP11150 499 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 CTSEP14091 401 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 TIMP2P16035 220 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 IL4RP24394 825 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 HTR1BP28222 390 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 INHBCP55103 352 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 YBEYP58557 167 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-206ENST00000471037 RHOAP61586 193 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms