RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 PTMAP06454 111 aaKnown RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 ATP1A3P13637 1013 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 PNLIPP16233 465 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 FERP16591 822 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 CD1CP29017 333 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 ALDH4A1P30038 563 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 SDC4P31431 198 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 CHRNA3P32297 505 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 SCNN1AP37088 669 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 GGCXP38435 758 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 EIF4A3P38919 411 aaKnown RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 RPL34P49207 117 aaKnown RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 HK3P52790 923 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 THOP1P52888 689 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 MAZP56270 477 aaKnown RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 RPS21P63220 83 aaKnown RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 NOMO3P69849 1222 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 CENPCQ03188 943 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 FOXM1Q08050 763 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 Q0VFX4 171 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 HLTFQ14527 1009 aaKnown RBP eCLIP5.88□□□□□ -1.47
VARS-222ENST00000470953 TAF5Q15542 800 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 ASIC2Q16515 512 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 CDO1Q16878 200 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 ALG11Q2TAA5 492 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 KLHL40Q2TBA0 621 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 TDRD12Q587J7 1177 aaKnown RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 ARSIQ5FYB1 569 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 CRB2Q5IJ48 1285 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 MS4A13Q5J8X5 152 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 BRMS1LQ5PSV4 323 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 DCAF12Q5T6F0 453 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 PAPD7Q5XG87 772 aaKnown RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 DUS1LQ6P1R4 473 aaKnown RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 DNAJC24Q6P3W2 148 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 OGFOD3Q6PK18 319 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 LVRNQ6Q4G3 990 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 KDELC2Q7Z4H8 507 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 FAM129CQ86XR2 697 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 ZNF354CQ86Y25 554 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 HID1Q8IV36 788 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 APLFQ8IW19 511 aaPredicted RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 PARP9Q8IXQ6 854 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 IQCKQ8N0W5 287 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 FSTL5Q8N475 847 aaPredicted RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 OR2A12Q8NGT7 310 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 GRIN3AQ8TCU5 1115 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 AZIN2Q96A70 460 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 ALG14Q96F25 216 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 LENG8Q96PV6 779 aaPredicted RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 SLC2A13Q96QE2 648 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 BPIFA3Q9BQP9 254 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 EFHD1Q9BUP0 239 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 HDAC8Q9BY41 377 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 ASPSCR1Q9BZE9 553 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 MUC3BQ9H195 1237 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 WDCPQ9H6R7 721 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 TMEM51Q9NW97 253 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 AKAP7Q9P0M2 348 aaPredicted RBP5.88□□□□□ -1.47
VARS-222ENST00000470953 VPS28Q9UK41 221 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 PRDM4Q9UKN5 801 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 VANGL2Q9ULK5 521 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 ITM2BQ9Y287 266 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 RPS6KL1Q9Y6S9 549 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 AKAP6Q13023 2319 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 HIVEP2P31629 2446 aa5.88□□□□□ -1.47
VARS-222ENST00000470953 LRP4O75096 1905 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 A0A1B0GUH1 482 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 SERINC4A6NH21 518 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 B4DGG1 531 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 E2F3O00716 465 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 EPHB6O15197 1021 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 SMAD6O43541 496 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 DPM1O60762 260 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 PAGE1O75459 146 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 GABBR2O75899 941 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 ADCY5O95622 1261 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 DLGAP3O95886 979 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 FYNP06241 537 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 RHOCP08134 193 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 TPM1P09493 284 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 ADRB3P13945 408 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 ZNF28P17035 718 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 NFKBIAP25963 317 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 CSF2RBP32927 897 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 CDH5P33151 784 aaPredicted RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 PLK1P53350 603 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 LIMK2P53671 638 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 JAM2P57087 298 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 PITX1P78337 314 aaPredicted RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 ATP11AP98196 1134 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 PPP2R2BQ00005 443 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 SULT2A1Q06520 285 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 SGCGQ13326 291 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 SEMA5AQ13591 1074 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 ARHGEF7Q14155 803 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 LBRQ14739 615 aaKnown RBP5.87□□□□□ -1.47
VARS-222ENST00000470953 ELOCQ15369 112 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 SLC25A52Q3SY17 297 aa5.87□□□□□ -1.47
VARS-222ENST00000470953 PLEKHN1Q494U1 663 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms