RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 SNX17Q15036 470 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 AGAP9Q5VTM2 703 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 PATL1Q86TB9 770 aaKnown RBP10.29□□□□□ -0.76
SMC4-210ENST00000469762 TRPV3Q8NET8 790 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 DQX1Q8TE96 717 aaKnown RBP10.29□□□□□ -0.76
SMC4-210ENST00000469762 SGCDQ92629 289 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 ACDQ96AP0 544 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 LRRC58Q96CX6 371 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 CENPNQ96H22 339 aaPredicted RBP10.29□□□□□ -0.76
SMC4-210ENST00000469762 EFHD1Q9BUP0 239 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 OSER1Q9NX31 292 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 FAF1Q9UNN5 650 aaPredicted RBP10.29□□□□□ -0.76
SMC4-210ENST00000469762 MBLAC1A4D2B0 266 aaPredicted RBP10.29□□□□□ -0.76
SMC4-210ENST00000469762 H3BMM5 538 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 ANXA9O76027 345 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 NCK1P16333 377 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 MAGEA8P43361 318 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 ADAM17P78536 824 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 KCNC4Q03721 635 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 BNIP3Q12983 259 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 ARL13BQ3SXY8 428 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 RWDD4Q6NW29 188 aaKnown RBP10.29□□□□□ -0.76
SMC4-210ENST00000469762 ZBTB46Q86UZ6 589 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 PAPD5Q8NDF8 572 aaKnown RBP10.29□□□□□ -0.76
SMC4-210ENST00000469762 SIK2Q9H0K1 926 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 ARNT2Q9HBZ2 717 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 CSNK1G1Q9HCP0 422 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 ENTPD7Q9NQZ7 604 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 SDR39U1Q9NRG7 319 aaPredicted RBP10.29□□□□□ -0.76
SMC4-210ENST00000469762 TBC1D13Q9NVG8 400 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 IKZF3Q9UKT9 509 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 KCTD3Q9Y597 815 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 PCDHGA4Q9Y5G9 962 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 CSADQ9Y600 493 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 PATJQ8NI35 1801 aa10.29□□□□□ -0.76
SMC4-210ENST00000469762 GBF1Q92538 1859 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 UPK1AO00322 258 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 AXIN1O15169 862 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 MT-ND1P03886 318 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 CES1P23141 567 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 RFC2P35250 354 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 BMXP51813 675 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 DIO3P55073 304 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 HERVK_113P63132 956 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 NFKB2Q00653 900 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 SEPT6Q14141 434 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 OR4D1Q15615 310 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 PAGE3Q5JUK9 113 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 DCDC5Q6ZRR9 648 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 KIAA0408Q6ZU52 694 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 KCTD8Q6ZWB6 473 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 CCDC126Q96EE4 140 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 SENP8Q96LD8 212 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 SLC30A3Q99726 388 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 PAAF1Q9BRP4 392 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 ERVK-6Q9BXR3 956 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.28□□□□□ -0.76
SMC4-210ENST00000469762 DOCK4Q8N1I0 1966 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 KPNA6O60684 536 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 FGF4P08620 206 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 WNT3AP56704 352 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 ECT2LQ008S8 904 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 PCSK7Q16549 785 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 XAF1Q6GPH4 301 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 KIAA2013Q8IYS2 634 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 PDPRQ8NCN5 879 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 OR52K2Q8NGK3 314 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 ZNF420Q8TAQ5 688 aaPredicted RBP10.28□□□□□ -0.76
SMC4-210ENST00000469762 DNAJB3Q8WWF6 145 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 HOPXQ9BPY8 73 aaPredicted RBP10.28□□□□□ -0.76
SMC4-210ENST00000469762 POLR1BQ9H9Y6 1135 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 NTN4Q9HB63 628 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 VTA1Q9NP79 307 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 RBM22Q9NW64 420 aaKnown RBP eCLIP10.28□□□□□ -0.765e-24■■■■■ 66.5
SMC4-210ENST00000469762 SH3GLB1Q9Y371 365 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 FADS3Q9Y5Q0 445 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 MROH6A6NGR9 719 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 BBIP1A8MTZ0 92 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 CPNE6O95741 557 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 F9P00740 461 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 RBP1P09455 135 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 CD1DP15813 335 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 ZNF182P17025 639 aaPredicted RBP10.28□□□□□ -0.76
SMC4-210ENST00000469762 HRH2P25021 359 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 GJA5P36382 358 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 CCR3P51677 355 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 CBX3Q13185 183 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 PLCL1Q15111 1095 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 ZNF829Q3KNS6 432 aaPredicted RBP10.28□□□□□ -0.76
SMC4-210ENST00000469762 KANK2Q63ZY3 851 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 BLOC1S3Q6QNY0 202 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 C14orf80Q86SX3 495 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 PTRH1Q86Y79 214 aaKnown RBP10.28□□□□□ -0.76
SMC4-210ENST00000469762 ATPAF2Q8N5M1 289 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 ZBTB8BQ8NAP8 495 aaPredicted RBP10.28□□□□□ -0.76
SMC4-210ENST00000469762 SEPT8Q92599 483 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 PLEKHA8Q96JA3 519 aa10.28□□□□□ -0.76
SMC4-210ENST00000469762 PAIP1Q9H074 479 aaKnown RBP10.28□□□□□ -0.76
SMC4-210ENST00000469762 UPF3AQ9H1J1 476 aaKnown RBP10.28□□□□□ -0.76
SMC4-210ENST00000469762 TMLHEQ9NVH6 421 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms