RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ARSIQ5FYB1 569 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 HECTD2Q5U5R9 776 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 GKAP1Q5VSY0 366 aaPredicted RBP18.95■□□□□ 0.62
SMC4-209ENST00000468653 FAM47EQ6ZV65 393 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 CLEC14AQ86T13 490 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 NUDCD3Q8IVD9 361 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 CEP97Q8IW35 865 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 TRIM42Q8IWZ5 723 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 PLD6Q8N2A8 252 aaKnown RBP18.95■□□□□ 0.62
SMC4-209ENST00000468653 SCG3Q8WXD2 468 aaKnown RBP18.95■□□□□ 0.62
SMC4-209ENST00000468653 EID2BQ96D98 161 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 LYSMD1Q96S90 227 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 TCF12Q99081 682 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 ELAC2Q9BQ52 826 aaKnown RBP18.95■□□□□ 0.62
SMC4-209ENST00000468653 TRMT61BQ9BVS5 477 aaKnown RBP18.95■□□□□ 0.62
SMC4-209ENST00000468653 PITPNM3Q9BZ71 974 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 MTG2Q9H4K7 406 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 INTS10Q9NVR2 710 aaKnown RBP18.95■□□□□ 0.62
SMC4-209ENST00000468653 ZNF358Q9NW07 568 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 IL36AQ9UHA7 158 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 CORO1CQ9ULV4 474 aaPredicted RBP18.95■□□□□ 0.62
SMC4-209ENST00000468653 VWA7Q9Y334 891 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 PPIL1Q9Y3C6 166 aa18.95■□□□□ 0.62
SMC4-209ENST00000468653 TBC1D3BA6NDS4 549 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 NPIPB15A6NHN6 443 aaPredicted RBP18.94■□□□□ 0.62
SMC4-209ENST00000468653 PFDN6O15212 129 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 ECI2O75521 394 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 LEFTY1O75610 366 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 SLC35E2BP0CK96 405 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 PGGT1BP53609 377 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 PEX6Q13608 980 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 ZNF460Q14592 562 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 CDKN3Q16667 212 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 BRAT1Q6PJG6 821 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 TPRG1Q6ZUI0 275 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 MICALL1Q8N3F8 863 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 ZNF366Q8N895 744 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 TERB1Q8NA31 727 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 MSLNLQ96KJ4 702 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 MECRQ9BV79 373 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 TTYH1Q9H313 450 aaPredicted RBP18.94■□□□□ 0.62
SMC4-209ENST00000468653 FAM96AQ9H5X1 160 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 SLC30A1Q9Y6M5 507 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 WASF2Q9Y6W5 498 aa18.94■□□□□ 0.62
SMC4-209ENST00000468653 A0A087X1B8 175 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.93■□□□□ 0.62
SMC4-209ENST00000468653 BIRC5O15392 142 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 PROCP04070 461 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 BPGMP07738 259 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 COL6A2P12110 1019 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 BGNP21810 368 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 OPRD1P41143 372 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 AARS2Q5JTZ9 985 aaKnown RBP18.93■□□□□ 0.62
SMC4-209ENST00000468653 FAM45BPQ6NSW5 357 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 CRTC1Q6UUV9 634 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 MTSS1LQ765P7 747 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 TAS2R42Q7RTR8 314 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 LCA5Q86VQ0 697 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 FAM45AQ8TCE6 357 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 UCMAQ8WVF2 138 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 NECTIN4Q96NY8 510 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 OLFM1Q99784 485 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 C19orf43Q9BQ61 176 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 OSBPL1AQ9BXW6 950 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 BRD9Q9H8M2 597 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 VPS9D1Q9Y2B5 631 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 UBA6A0AVT1 1052 aaPredicted RBP18.93■□□□□ 0.62
SMC4-209ENST00000468653 TTPAP49638 278 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 CDKN1CP49918 316 aaPredicted RBP18.93■□□□□ 0.62
SMC4-209ENST00000468653 XIAPP98170 497 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 SEMG2Q02383 582 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 CACNG1Q06432 222 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 ADGRE1Q14246 886 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 ITPRIPL2Q3MIP1 535 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 LRIT3Q3SXY7 679 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 NAIF1Q69YI7 327 aaPredicted RBP18.93■□□□□ 0.62
SMC4-209ENST00000468653 TSPAN33Q86UF1 283 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 KCTD4Q8WVF5 259 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.93■□□□□ 0.622e-13■■■■■ 56.3
SMC4-209ENST00000468653 LRIG1Q96JA1 1093 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 MCCC1Q96RQ3 725 aaPredicted RBP18.93■□□□□ 0.62
SMC4-209ENST00000468653 RPP25Q9BUL9 199 aaKnown RBP18.93■□□□□ 0.62
SMC4-209ENST00000468653 SLCO1B3Q9NPD5 702 aa18.93■□□□□ 0.62
SMC4-209ENST00000468653 KIF26AQ9ULI4 1882 aaPredicted RBP18.93■□□□□ 0.62
SMC4-209ENST00000468653 RUVBL2Q9Y230 463 aaKnown RBP18.93■□□□□ 0.62
SMC4-209ENST00000468653 SF3A3Q12874 501 aaKnown RBP eCLIP18.92■□□□□ 0.624e-10■■■■■ 210.9
SMC4-209ENST00000468653 PREPLQ4J6C6 727 aaPredicted RBP18.92■□□□□ 0.62
SMC4-209ENST00000468653 RNF187Q5TA31 235 aaPredicted RBP18.92■□□□□ 0.62
SMC4-209ENST00000468653 PSAPL1Q6NUJ1 521 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 FOXR1Q6PIV2 292 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 FAM151BQ6UXP7 276 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 TBC1D1Q86TI0 1168 aaPredicted RBP18.92■□□□□ 0.62
SMC4-209ENST00000468653 PIANPQ8IYJ0 282 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 CACNA2D3Q8IZS8 1091 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 PHTF2Q8N3S3 785 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 KDM1BQ8NB78 822 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 SMRP1Q8NCR6 262 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 SEC16BQ96JE7 1060 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 SCYL1Q96KG9 808 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 C1QTNF1Q9BXJ1 281 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms