RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MRFAP1Q9Y605 127 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 HS3ST4Q9Y661 456 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 NUMBLQ9Y6R0 609 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CEP290O15078 2479 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 MYO7AQ13402 2215 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 PTPRDP23468 1912 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 hCG_1818297A0A087WSY0 165 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 C3orf70A6NLC5 250 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 E9PAM4 449 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 F5H5T6 163 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 H7C0C1 242 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 I6L893 689 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 PGRMC1O00264 195 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 DFFAO00273 331 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 APOL1O14791 398 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TBL1XO60907 577 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 STC2O76061 302 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CNTN5O94779 1100 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TJP3O95049 919 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 PCDH8O95206 1070 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 SLU7O95391 586 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 C1RP00736 705 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 OAS1P00973 400 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 IGLV3-25P01717 112 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 KLKB1P03952 638 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CLEC2LP0C7M8 214 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 FOSL2P15408 326 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 HOXB8P17481 243 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ERCC2P18074 760 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TACR2P21452 398 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 KCNA5P22460 613 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 IL4RP24394 825 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 DDX6P26196 483 aaKnown RBP eCLIP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 EPHB2P29323 1055 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 HOXA9P31269 272 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CDKN2BP42772 138 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ATP5OP48047 213 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 KCNJ1P48048 391 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ARSEP51690 589 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 SCAND1P57086 179 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ZXDBP98169 803 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ITKQ08881 620 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 KLF1Q13351 362 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 KCNC3Q14003 757 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TFDP2Q14188 446 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TRIP13Q15645 432 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 UGT8Q16880 541 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TFDP3Q5H9I0 405 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 MS4A13Q5J8X5 152 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 PITRM1Q5JRX3 1037 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TEX35Q5T0J7 233 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 NUGGCQ68CJ6 796 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 FBXL22Q6P050 247 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 BORAQ6PGQ7 559 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 DARS2Q6PI48 645 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TMEM184AQ6ZMB5 413 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 RFX8Q6ZV50 586 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CYP4V2Q6ZWL3 525 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 GSTA5Q7RTV2 222 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 BNIPLQ7Z465 357 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 POLNQ7Z5Q5 900 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CIR1Q86X95 450 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ARID3BQ8IVW6 561 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 BBS7Q8IWZ6 715 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CMTM8Q8IZV2 173 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 RASGEF1CQ8N431 466 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CARNMT1Q8N4J0 409 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF276Q8N554 614 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 DEFB123Q8N688 67 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 PQLC3Q8N755 202 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CDYL2Q8N8U2 506 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 LEMD2Q8NC56 503 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CCNYQ8ND76 341 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TTC8Q8TAM2 541 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ACTRT1Q8TDG2 376 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 DDI1Q8WTU0 396 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 MAIP1Q8WWC4 291 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 ATG4AQ8WYN0 398 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 USP13Q92995 863 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 IGSF8Q969P0 613 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 MAGOHBQ96A72 148 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 NTAN1Q96AB6 310 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TBC1D31Q96DN5 1066 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 TMA16Q96EY4 203 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CELF6Q96J87 481 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 HIST1H2AHQ96KK5 128 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 BTN2A3PQ96KV6 586 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CCDC114Q96M63 670 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 RIPOR3Q96MK2 946 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 RPRD1AQ96P16 312 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 KCNC2Q96PR1 638 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 CSPG4P5Q96PW8 444 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 RNF157Q96PX1 679 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 HAPLN3Q96S86 360 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 KRT12Q99456 494 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 NAP1L3Q99457 506 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 HIST1H2AJQ99878 128 aa4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 DDX50Q9BQ39 737 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-204ENST00000468545 DCLK3Q9C098 648 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms