RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ADRA1AP35348 466 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 SPINT3P49223 89 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 BLKP51451 505 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 KIAA1024LP59773 190 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 BNIP3Q12983 259 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 GALNT3Q14435 633 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 NFATC4Q14934 902 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 SLC1A5Q15758 541 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 DENND2CQ68D51 928 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 GLRX5Q86SX6 157 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 SLC35F6Q8N357 371 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 PLA2G15Q8NCC3 412 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 RHBDD1Q8TEB9 315 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 SETD7Q8WTS6 366 aaKnown RBP19.99■□□□□ 0.79
NPHP4-206ENST00000468253 C1orf54Q8WWF1 131 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 LRRC45Q96CN5 670 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 TEX101Q9BY14 249 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 ARNT2Q9HBZ2 717 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 GOLGA6AQ9NYA3 693 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 CSNK1G3Q9Y6M4 447 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 PLXNA2O75051 1894 aa19.99■□□□□ 0.79
NPHP4-206ENST00000468253 DCHS1Q96JQ0 3298 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 CACNA1AO00555 2505 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 NEMP2A6NFY4 417 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 CACNB4O00305 520 aaPredicted RBP19.98■□□□□ 0.79
NPHP4-206ENST00000468253 CES2O00748 559 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 PCCBP05166 539 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 FGF1P05230 155 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 C1SP09871 688 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 DGKAP23743 735 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 CXCR5P32302 372 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 EIF2B5Q13144 721 aaKnown RBP19.98■□□□□ 0.79
NPHP4-206ENST00000468253 LONRF2Q1L5Z9 754 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 SIRPB2Q5JXA9 342 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 TPRG1LQ5T0D9 272 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 ARHGEF18Q6ZSZ5 1173 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 SLC25A45Q8N413 288 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 IPMKQ8NFU5 416 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 ATG4AQ8WYN0 398 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 FUBP1Q96AE4 644 aaKnown RBP19.98■□□□□ 0.79
NPHP4-206ENST00000468253 AP2M1Q96CW1 435 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 NAP1L3Q99457 506 aaPredicted RBP19.98■□□□□ 0.79
NPHP4-206ENST00000468253 GORASP1Q9BQQ3 440 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 FAM83DQ9H4H8 585 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 DNAJC28Q9NX36 388 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 PKD2L2Q9NZM6 624 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 FEZ2Q9UHY8 353 aaPredicted RBP19.98■□□□□ 0.79
NPHP4-206ENST00000468253 PYCARDQ9ULZ3 195 aa19.98■□□□□ 0.79
NPHP4-206ENST00000468253 H3BM21 787 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 PIAS2O75928 621 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 PSMB4P28070 264 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 NOVA1P51513 510 aaKnown RBP19.97■□□□□ 0.79
NPHP4-206ENST00000468253 PPARDQ03181 441 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 TRIP6Q15654 476 aaKnown RBP19.97■□□□□ 0.79
NPHP4-206ENST00000468253 ADAMTSL4Q6UY14 1074 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 C4orf22Q6V702 233 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 SDR16C5Q8N3Y7 309 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 DEFB124Q8NES8 71 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 BAHD1Q8TBE0 780 aaPredicted RBP19.97■□□□□ 0.79
NPHP4-206ENST00000468253 DTX3LQ8TDB6 740 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 EID2BQ96D98 161 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 WDR92Q96MX6 357 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 FSD1LQ9BXM9 530 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 GPR63Q9BZJ6 419 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 WDR26Q9H7D7 661 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 PHPT1Q9NRX4 125 aaPredicted RBP19.97■□□□□ 0.79
NPHP4-206ENST00000468253 NFKBIL1Q9UBC1 381 aaPredicted RBP19.97■□□□□ 0.79
NPHP4-206ENST00000468253 OR1A2Q9Y585 309 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 DGKBQ9Y6T7 804 aa19.97■□□□□ 0.79
NPHP4-206ENST00000468253 A0A0U1RQS6 177 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 K7ESM1 405 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 SCAMP1O15126 338 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 AGTP01019 485 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 JUNDP17535 347 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 ACTN2P35609 894 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 HMGCLP35914 325 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 GDF10P55107 478 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 IL9RQ01113 521 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 PPM1JQ5JR12 505 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 ZDHHC20Q5W0Z9 365 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 KCTD11Q693B1 232 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 ENPP7Q6UWV6 458 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 RFLNAQ6ZTI6 216 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 LYSMD3Q7Z3D4 306 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 C19orf43Q9BQ61 176 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 SLC13A1Q9BZW2 595 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.96■□□□□ 0.794e-6■□□□□ 8.5
NPHP4-206ENST00000468253 SPASTQ9UBP0 616 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 KLF15Q9UIH9 416 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 ZNF711Q9Y462 761 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 DNAH14Q0VDD8 3507 aa19.96■□□□□ 0.79
NPHP4-206ENST00000468253 GOLGA8CPA6NN73 597 aa19.95■□□□□ 0.78
NPHP4-206ENST00000468253 USP27XA6NNY8 438 aa19.95■□□□□ 0.78
NPHP4-206ENST00000468253 ERI2A8K979 691 aaKnown RBP19.95■□□□□ 0.78
NPHP4-206ENST00000468253 PPFIA2O75334 1257 aa19.95■□□□□ 0.78
NPHP4-206ENST00000468253 METTL18O95568 372 aa19.95■□□□□ 0.78
NPHP4-206ENST00000468253 ATP1A1P05023 1023 aaKnown RBP19.95■□□□□ 0.78
NPHP4-206ENST00000468253 MYCLP1P12525 358 aaPredicted RBP19.95■□□□□ 0.78
NPHP4-206ENST00000468253 FDFT1P37268 417 aa19.95■□□□□ 0.78
NPHP4-206ENST00000468253 GPR1P46091 355 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms