RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 USP12O75317 370 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 CSO75390 466 aaKnown RBP10.36□□□□□ -0.75
SSR3-205ENST00000467789 CCNB1P14635 433 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 PNLIPP16233 465 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 GM2AP17900 193 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 TGM2P21980 687 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 KDELR1P24390 212 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 GJC1P36383 396 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 SLC1A1P43005 524 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 MMP16P51512 607 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 ERVPABLB-1P60509 514 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 MAXP61244 160 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 ITKQ08881 620 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 TCEAL1Q15170 157 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 ATP13A4Q4VNC1 1196 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 ZFYVE27Q5T4F4 411 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 ZNF765Q7L2R6 523 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 SLC35G2Q8TBE7 412 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 KIAA1524Q8TCG1 905 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 PIH1D2Q8WWB5 315 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 DTD2Q96FN9 168 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 PDXPQ96GD0 296 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 RNF157Q96PX1 679 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 CCDC3Q9BQI4 270 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 PACSIN1Q9BY11 444 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 TEX101Q9BY14 249 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 NHEJ1Q9H9Q4 299 aaPredicted RBP10.36□□□□□ -0.75
SSR3-205ENST00000467789 TRNAU1APQ9NX07 287 aaKnown RBP10.36□□□□□ -0.75
SSR3-205ENST00000467789 GPR34Q9UPC5 381 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 RAI2Q9Y5P3 530 aa10.36□□□□□ -0.75
SSR3-205ENST00000467789 CELSR3Q9NYQ7 3312 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 A0A0J9YYE9 177 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 PRSS38A1L453 326 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 NPIPB15A6NHN6 443 aaPredicted RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 A8MX80 341 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 NTN3O00634 580 aaPredicted RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 ZW10O43264 779 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 TRBC1P01850 177 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 MYF5P13349 255 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 GLB1P16278 677 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 ZFXP17010 805 aaPredicted RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 LHCGRP22888 699 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 EPHB1P54762 984 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 PCBP4P57723 403 aaKnown RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 TAS2R40P59535 323 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 GABREP78334 506 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 PPIDQ08752 370 aaKnown RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 SPIDRQ14159 915 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 MESDQ14696 234 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 COL28A1Q2UY09 1125 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 ODF2Q5BJF6 829 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 OGFOD3Q6PK18 319 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 PDZD3Q86UT5 571 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 CCDC13Q8IYE1 715 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 NRSN1Q8IZ57 195 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 PQLC3Q8N755 202 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 CCNYQ8ND76 341 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 ZNF248Q8NDW4 579 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 GPR156Q8NFN8 814 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 HNRNPLLQ8WVV9 542 aaKnown RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 OR1E3Q8WZA6 343 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 LYSMD1Q96S90 227 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 CHP1Q99653 195 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 TDRD1Q9BXT4 1180 aaKnown RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 BRD8Q9H0E9 1235 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 CAAP1Q9H8G2 361 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 FGF22Q9HCT0 170 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 THSD1Q9NS62 852 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 RBM22Q9NW64 420 aaKnown RBP eCLIP10.35□□□□□ -0.75
SSR3-205ENST00000467789 DDX56Q9NY93 547 aaKnown RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 DTLQ9NZJ0 730 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 GULP1Q9UBP9 304 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 APPL1Q9UKG1 709 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 PCDHB1Q9Y5F3 818 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 PCDHGA8Q9Y5G5 932 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 COL27A1Q8IZC6 1860 aaPredicted RBP10.35□□□□□ -0.75
SSR3-205ENST00000467789 IGSF10Q6WRI0 2623 aa10.35□□□□□ -0.75
SSR3-205ENST00000467789 CACNA1GO43497 2377 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 TTC24A2A3L6 582 aaPredicted RBP10.34□□□□□ -0.75
SSR3-205ENST00000467789 LRRD1A4D1F6 860 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 CAPN8A6NHC0 703 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 AKR1B15C9JRZ8 316 aaPredicted RBP10.34□□□□□ -0.75
SSR3-205ENST00000467789 TLX3O43711 291 aaPredicted RBP10.34□□□□□ -0.75
SSR3-205ENST00000467789 NUDT21O43809 227 aaKnown RBP10.34□□□□□ -0.75
SSR3-205ENST00000467789 CELA2BP08218 269 aaPredicted RBP10.34□□□□□ -0.75
SSR3-205ENST00000467789 PDHA1P08559 390 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 ETV3P41162 512 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 HADHBP55084 474 aaKnown RBP10.34□□□□□ -0.75
SSR3-205ENST00000467789 IFI35P80217 286 aaPredicted RBP10.34□□□□□ -0.75
SSR3-205ENST00000467789 CDK3Q00526 305 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 GBE1Q04446 702 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 ILF3Q12906 894 aaKnown RBP eCLIP10.34□□□□□ -0.75
SSR3-205ENST00000467789 EIF3IQ13347 325 aaKnown RBP10.34□□□□□ -0.75
SSR3-205ENST00000467789 PDK1Q15118 436 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 PERM1Q5SV97 790 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 SLC9A4Q6AI14 798 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 RAET1GQ6H3X3 334 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 C19orf48Q6RUI8 117 aa10.34□□□□□ -0.75
SSR3-205ENST00000467789 SARM1Q6SZW1 724 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms