RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 TMX2-CTNND1H3BSU7 103 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 PGLSO95336 258 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 PDHA1P08559 390 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 ALPIP09923 528 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 ELFN1P0C7U0 828 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 CYP2A6P11509 494 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 CTPS1P17812 591 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 NFKBIAP25963 317 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 IGFALSP35858 605 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 NR2C2P49116 596 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 EPHB1P54762 984 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 GABREP78334 506 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 TLE3Q04726 772 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 ADCY2Q08462 1091 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 NIPAL4Q0D2K0 466 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 C19orf57Q0VDD7 668 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 RALGDSQ12967 914 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 ACOX1Q15067 660 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 PTPRRQ15256 657 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 IRF4Q15306 451 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 ISXQ2M1V0 245 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 WSCD2Q2TBF2 565 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 PRRT3Q5FWE3 981 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 FAXCQ5TGI0 409 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 RBM44Q6ZP01 1051 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 EFL1Q7Z2Z2 1120 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 SPACA3Q8IXA5 215 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 NDUFAF2Q8N183 169 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 ARRDC2Q8TBH0 407 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 P3H4Q92791 437 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 HAUS1Q96CS2 278 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 WBP1Q96G27 269 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 BBC3Q96PG8 261 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 AMFRQ9UKV5 643 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 CHKBQ9Y259 395 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 PCDHB1Q9Y5F3 818 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 PCDHGA8Q9Y5G5 932 aa14.08□□□□□ -0.16
CCHCR1-211ENST00000467553 CCDC66A2RUB6 948 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 CPED1A4D0V7 1026 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 GRID2IPA4D2P6 1211 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 RECQL5O94762 991 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 PCCBP05166 539 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 PECAM1P16284 738 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 TGM2P21980 687 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 RBMS1P29558 406 aaKnown RBP14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 VIPR1P32241 457 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 CTNNA1P35221 906 aaKnown RBP14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 CD86P42081 329 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 TMPRSS3P57727 454 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 IFI35P80217 286 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 ZBTB17Q13105 803 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 IHHQ14623 411 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 CDKN3Q16667 212 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 DEFB133Q30KQ1 61 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 TPRG1LQ5T0D9 272 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 CCDC181Q5TID7 509 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 PEX26Q7Z412 305 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 ZC3H18Q86VM9 953 aaKnown RBP14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 CNTD1Q8N815 330 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 TFB1MQ8WVM0 346 aaKnown RBP14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 PIH1D2Q8WWB5 315 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 SLC39A7Q92504 469 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 AGAP3Q96P47 875 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 OLFM3Q96PB7 478 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 BRD8Q9H0E9 1235 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 KCTD5Q9NXV2 234 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 DOLKQ9UPQ8 538 aa14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 GCN1Q92616 2671 aaKnown RBP14.07□□□□□ -0.16
CCHCR1-211ENST00000467553 A0A0U1RQS6 177 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 ERVH48-1M5A8F1 160 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 MPOP05164 745 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 HOXC4P09017 264 aaPredicted RBP14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 CA4P22748 312 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 CTNNA2P26232 953 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 CETN2P41208 172 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 HK3P52790 923 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 RWDD2BP57060 319 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 COPS2P61201 443 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 CCDC173Q0VFZ6 552 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 MTM1Q13496 603 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 ARHGEF7Q14155 803 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 INPP5AQ14642 412 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 ALG1LQ6GMV1 187 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 GUSBP11Q6P575 273 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 USP45Q70EL2 814 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 KDELC2Q7Z4H8 507 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 NT5DC3Q86UY8 548 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 GKN2Q86XP6 184 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 SYCE1Q8N0S2 351 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 ARL14Q8N4G2 192 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 LRRC57Q8N9N7 239 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 WDR36Q8NI36 951 aaKnown RBP14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 SCRN2Q96FV2 425 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 CRELD1Q96HD1 420 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 SLC46A1Q96NT5 459 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 SMIM14Q96QK8 99 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 RBM15Q96T37 977 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 APOOQ9BUR5 198 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 LRRC61Q9BV99 259 aa14.06□□□□□ -0.16
CCHCR1-211ENST00000467553 PCDH9Q9HC56 1237 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms