RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 HSF4Q9ULV5 492 aa3.86□□□□□ -1.79
VPS50-209ENST00000467326 PAM16Q9Y3D7 125 aa3.86□□□□□ -1.79
VPS50-209ENST00000467326 PCDHGB5Q9Y5G0 923 aa3.86□□□□□ -1.79
VPS50-209ENST00000467326 IGLV5-52A0A0A0MRZ9 124 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 A0A1B0GVM2 712 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 PLSCR5A0PG75 271 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 TYW5A2RUC4 315 aaKnown RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 H0Y626 953 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 SCGB1D1O95968 90 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 CH25HO95992 272 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 HSPA1AP0DMV8 641 aaKnown RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 HSPA1BP0DMV9 641 aaKnown RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 ACADMP11310 421 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 KRT10P13645 584 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 P4HA1P13674 534 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 ZNF12P17014 697 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 ZNF8P17098 575 aaPredicted RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 PTPN2P17706 415 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 CASQ1P31415 396 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 ARL3P36405 182 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 ANP32AP39687 249 aaKnown RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 HNF4AP41235 474 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 CCR5P51681 352 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 CCR9P51686 369 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 BNC1Q01954 994 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 CHAF1BQ13112 559 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 MAMLD1Q13495 774 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 ZNF667Q5HYK9 610 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 ARMC4Q5T2S8 1044 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 CES5AQ6NT32 575 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 KLHL24Q6TFL4 600 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 FAM47EQ6ZV65 393 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 MOB3CQ70IA8 216 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 H1FNTQ75WM6 255 aaPredicted RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 MCM10Q7L590 875 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 PRPF39Q86UA1 669 aaKnown RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 FAM160B2Q86V87 743 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 NLRP14Q86W24 1093 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 CPOQ8IVL8 374 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 TAGAPQ8N103 731 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 OR8H3Q8N146 312 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 NUP93Q8N1F7 819 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 AADATQ8N5Z0 425 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 GOT1L1Q8NHS2 421 aaPredicted RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 TRIB2Q92519 343 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 TAF4BQ92750 862 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 CALML4Q96GE6 196 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 DESI2Q9BSY9 194 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 OR10A4Q9H209 315 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 TRPV4Q9HBA0 871 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 CCDC177Q9NQR7 707 aaPredicted RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 OR6C3Q9NZP0 311 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 NDRG3Q9UGV2 375 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 MOSPD1Q9UJG1 213 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 GTF3C4Q9UKN8 822 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 RRP15Q9Y3B9 282 aaKnown RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 MTF2Q9Y483 593 aaPredicted RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 ZFP37Q9Y6Q3 630 aaPredicted RBP3.85□□□□□ -1.79
VPS50-209ENST00000467326 ADGRF5Q8IZF2 1346 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 PASKQ96RG2 1323 aa3.85□□□□□ -1.79
VPS50-209ENST00000467326 hCG_1807616A0A1W2PRN6 198 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 HSPB2A8KAH6 182 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 BTBD18B2RXH4 712 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 NDC80O14777 642 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 GUCY1B2O75343 617 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 TGDSO95455 350 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 ZBTB11O95625 1053 aaPredicted RBP3.84□□□□□ -1.79
VPS50-209ENST00000467326 PPP1R3DO95685 299 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 MT-ND3P03897 115 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 CLTBP09497 229 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 PCNAP12004 261 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 EEF2P13639 858 aaKnown RBP3.84□□□□□ -1.79
VPS50-209ENST00000467326 SLC2A4P14672 509 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 PORP16435 677 aaPredicted RBP3.84□□□□□ -1.79
VPS50-209ENST00000467326 SRD5A1P18405 259 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 RYKP34925 604 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 PSMC2P35998 433 aaKnown RBP3.84□□□□□ -1.79
VPS50-209ENST00000467326 HDAC4P56524 1084 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 UBASH3AP57075 661 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 CHRNDQ07001 517 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 TNIP1Q15025 636 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 TAF7Q15545 349 aaPredicted RBP3.84□□□□□ -1.79
VPS50-209ENST00000467326 HSPB2Q16082 182 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 TSTQ16762 297 aaKnown RBP3.84□□□□□ -1.79
VPS50-209ENST00000467326 TMEM266Q2M3C6 531 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 ESCO2Q56NI9 601 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.84□□□□□ -1.79
VPS50-209ENST00000467326 TMTC3Q6ZXV5 915 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 C16orf82Q7Z2V1 217 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 TBC1D26Q86UD7 250 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 ARMC8Q8IUR7 673 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 GJC3Q8NFK1 279 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 TNIP2Q8NFZ5 429 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 GSDMBQ8TAX9 411 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 ARRDC2Q8TBH0 407 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 NOC3LQ8WTT2 800 aaKnown RBP3.84□□□□□ -1.79
VPS50-209ENST00000467326 ELP4Q96EB1 424 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 ZC3HAV1LQ96H79 300 aaKnown RBP3.84□□□□□ -1.79
VPS50-209ENST00000467326 GPATCH1Q9BRR8 931 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms