RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 RMDN1Q96DB5 314 aa11.04□□□□□ -0.64
MSH5-212ENST00000467319 KLHDC7BQ96G42 594 aa11.04□□□□□ -0.64
MSH5-212ENST00000467319 SRPK1Q96SB4 655 aaKnown RBP11.04□□□□□ -0.64
MSH5-212ENST00000467319 NAP1L3Q99457 506 aaPredicted RBP11.04□□□□□ -0.64
MSH5-212ENST00000467319 ELF4Q99607 663 aaPredicted RBP11.04□□□□□ -0.64
MSH5-212ENST00000467319 FICDQ9BVA6 458 aa11.04□□□□□ -0.64
MSH5-212ENST00000467319 FSD1LQ9BXM9 530 aa11.04□□□□□ -0.64
MSH5-212ENST00000467319 GAREM1Q9H706 876 aa11.04□□□□□ -0.64
MSH5-212ENST00000467319 ARNT2Q9HBZ2 717 aa11.04□□□□□ -0.64
MSH5-212ENST00000467319 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
MSH5-212ENST00000467319 CDV3Q9UKY7 258 aaKnown RBP11.04□□□□□ -0.64
MSH5-212ENST00000467319 ZNF148Q9UQR1 794 aa11.04□□□□□ -0.64
MSH5-212ENST00000467319 PCDHGB2Q9Y5G2 931 aa11.04□□□□□ -0.64
MSH5-212ENST00000467319 COL5A1P20908 1838 aaPredicted RBP11.03□□□□□ -0.64
MSH5-212ENST00000467319 CABIN1Q9Y6J0 2220 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 CTAGE9A4FU28 777 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 RGSL1A5PLK6 1076 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 C4orf47A7E2U8 309 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 YKT6O15498 198 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 PCDHGA12O60330 932 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 PHF2O75151 1096 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 SUN1O94901 812 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 CLDN7O95471 211 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 AGTP01019 485 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 HOXC4P09017 264 aaPredicted RBP11.03□□□□□ -0.64
MSH5-212ENST00000467319 CD59P13987 128 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 NME1P15531 152 aaKnown RBP11.03□□□□□ -0.64
MSH5-212ENST00000467319 TSHRP16473 764 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 SPINT3P49223 89 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 CCT8P50990 548 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 ATXN3P54252 364 aaPredicted RBP11.03□□□□□ -0.64
MSH5-212ENST00000467319 ETF1P62495 437 aaKnown RBP11.03□□□□□ -0.64
MSH5-212ENST00000467319 PRPSAP1Q14558 356 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 RSPO4Q2I0M5 234 aaPredicted RBP11.03□□□□□ -0.64
MSH5-212ENST00000467319 HENMT1Q5T8I9 393 aaKnown RBP11.03□□□□□ -0.64
MSH5-212ENST00000467319 FAXCQ5TGI0 409 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 ADAMTSL4Q6UY14 1074 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 DBX2Q6ZNG2 339 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 PIP4P1Q86T03 277 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 PRUNE1Q86TP1 453 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 NLRP8Q86W28 1048 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 PARGQ86W56 976 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 CREG2Q8IUH2 290 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 NRSN1Q8IZ57 195 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 TBL1YQ9BQ87 522 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 AP1M1Q9BXS5 423 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 ABCG8Q9H221 673 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 TRABDQ9H4I3 376 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 LRRC40Q9H9A6 602 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 HACD3Q9P035 362 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 PAK5Q9P286 719 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 PNMA8BQ9ULN7 279 aaPredicted RBP11.03□□□□□ -0.64
MSH5-212ENST00000467319 NEU2Q9Y3R4 380 aa11.03□□□□□ -0.64
MSH5-212ENST00000467319 CNOT1A5YKK6 2376 aaKnown RBP11.03□□□□□ -0.64
MSH5-212ENST00000467319 ERI2A8K979 691 aaKnown RBP11.02□□□□□ -0.65
MSH5-212ENST00000467319 AURKAO14965 403 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 USP12O75317 370 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 IFNB1P01574 187 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 MYCLP1P12525 358 aaPredicted RBP11.02□□□□□ -0.65
MSH5-212ENST00000467319 SDHBP21912 280 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 RPL22P35268 128 aaKnown RBP11.02□□□□□ -0.65
MSH5-212ENST00000467319 FDFT1P37268 417 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 KCNJ1P48048 391 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 FNTAP49354 379 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 EIF2B5Q13144 721 aaKnown RBP11.02□□□□□ -0.65
MSH5-212ENST00000467319 PDE1CQ14123 709 aaPredicted RBP11.02□□□□□ -0.65
MSH5-212ENST00000467319 INPP5AQ14642 412 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 NFATC4Q14934 902 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 DENND2CQ68D51 928 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 KCTD16Q68DU8 428 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 PNCKQ6P2M8 343 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 TMC3Q7Z5M5 1100 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 HEATR4Q86WZ0 1026 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 SLC25A41Q8N5S1 370 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 CCDC89Q8N998 374 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 BAHD1Q8TBE0 780 aaPredicted RBP11.02□□□□□ -0.65
MSH5-212ENST00000467319 SAP25Q8TEE9 199 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 SCAMP4Q969E2 229 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 FUBP1Q96AE4 644 aaKnown RBP11.02□□□□□ -0.65
MSH5-212ENST00000467319 TBATAQ96M53 351 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 APOL2Q9BQE5 337 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 RTKNQ9BST9 563 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 APOOQ9BUR5 198 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 TEX101Q9BY14 249 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 CDH19Q9H159 772 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 WDR26Q9H7D7 661 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 ZFYVE1Q9HBF4 777 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 EIF2B3Q9NR50 452 aaKnown RBP11.02□□□□□ -0.65
MSH5-212ENST00000467319 TM7SF3Q9NS93 570 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 FEZ2Q9UHY8 353 aaPredicted RBP11.02□□□□□ -0.65
MSH5-212ENST00000467319 SHOC2Q9UQ13 582 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 OR1A2Q9Y585 309 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 SAR1BQ9Y6B6 198 aa11.02□□□□□ -0.65
MSH5-212ENST00000467319 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.01□□□□□ -0.65
MSH5-212ENST00000467319 GOLGA6L10A0A0M3HER8 536 aa11.01□□□□□ -0.65
MSH5-212ENST00000467319 GOLGA6CA6NDK9 693 aa11.01□□□□□ -0.65
MSH5-212ENST00000467319 GOLGA6BA6NDN3 693 aa11.01□□□□□ -0.65
MSH5-212ENST00000467319 CSF2P04141 144 aa11.01□□□□□ -0.65
MSH5-212ENST00000467319 ZSCAN5DPP0CG00 497 aa11.01□□□□□ -0.65
MSH5-212ENST00000467319 GOLGA6DP0CG33 693 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms