RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CXCL17Q6UXB2 119 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 LINC00299Q6ZSB3 139 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 STRA8Q7Z7C7 330 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 Q8N9G6 341 aaPredicted RBP18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 SLCO4A1Q96BD0 722 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 PPP1R36Q96LQ0 422 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 COLEC11Q9BWP8 271 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 AP5M1Q9H0R1 490 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 PKD2L2Q9NZM6 624 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 OR12D3Q9UGF7 316 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 SLC27A5Q9Y2P5 690 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 TCRBV3S1A0A5B6 114 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 A6NL46 340 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 TBKBP1A7MCY6 615 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 HAS3O00219 553 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 DEAF1O75398 565 aaPredicted RBP18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 SEC14L2O76054 403 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 KCNH1O95259 989 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 JCHAINP01591 159 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 MYCLP1P12525 358 aaPredicted RBP18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 MLNP12872 115 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 JUNBP17275 347 aaPredicted RBP18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 PAFAH1B3Q15102 231 aaKnown RBP18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 LDLRAP1Q5SW96 308 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 ARHGAP36Q6ZRI8 547 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 OTOP3Q7RTS5 596 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 BNIPLQ7Z465 357 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 DSG4Q86SJ6 1040 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 MAPK15Q8TD08 544 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 RNF34Q969K3 372 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 SCUBE2Q9NQ36 999 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 VANGL2Q9ULK5 521 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 SLC45A1Q9Y2W3 748 aa18.07■□□□□ 0.48
SNAPC3-205ENST00000467062 ASNA1O43681 348 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 CRYZL1O95825 349 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 UGT2B4P06133 528 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 NFKB1P19838 968 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 BDNFP23560 247 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 CXCR2P25025 360 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 LEPRP48357 1165 aaKnown RBP18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 PSMD8P48556 350 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 HLCSP50747 726 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 FSCN1Q16658 493 aaKnown RBP18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 MORN1Q5T089 497 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 FSTL4Q6MZW2 842 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 UGT3A1Q6NUS8 523 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 PARP8Q8N3A8 854 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 TDRD5Q8NAT2 981 aaKnown RBP18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 SCAMP5Q8TAC9 235 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 TMEM209Q96SK2 561 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 BEGAINQ9BUH8 593 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 MLPHQ9BV36 600 aaPredicted RBP18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 WDCPQ9H6R7 721 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 AKIP1Q9NQ31 210 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 SNX15Q9NRS6 342 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 RCOR3Q9P2K3 495 aaPredicted RBP18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 GOLGA8QA0A0J9YX86 632 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 GOLGA8OA6NCC3 632 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 GOLGA8NF8WBI6 632 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 BMPR1AP36894 532 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 BRCC3P46736 316 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 BFSP2Q13515 415 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 TIGD5Q53EQ6 642 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 ZNF280DQ6N043 979 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 CLIP4Q8N3C7 705 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 SPATA22Q8NHS9 363 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 KCTD13Q8WZ19 329 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 SEPT8Q92599 483 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 FAM105AQ9NUU6 356 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 HACD3Q9P035 362 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 FBXW11Q9UKB1 542 aa18.06■□□□□ 0.48
SNAPC3-205ENST00000467062 ARL5CA6NH57 179 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 TEX28O15482 410 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 LRIG2O94898 1065 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 PGK1P00558 417 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 LTFP02788 710 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 THP07101 528 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 UBL4AP11441 157 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 LRPAP1P30533 357 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 PGFP49763 221 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 CPT1AP50416 773 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 TMC5Q6UXY8 1006 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 PSTKQ8IV42 348 aaKnown RBP18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 CBR4Q8N4T8 237 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 GOLM1Q8NBJ4 401 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 UPF1Q92900 1129 aaKnown RBP eCLIP18.05■□□□□ 0.482e-6■■□□□ 14.2
SNAPC3-205ENST00000467062 CPNE5Q9HCH3 593 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 SCN4AP35499 1836 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 PHGDHO43175 533 aaKnown RBP18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 TOMM70O94826 608 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 C7P10643 843 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 NR4A2P43354 598 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 PSME3P61289 254 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 PURAQ00577 322 aaKnown RBP18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 GNASQ5JWF2 1037 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 AGMOQ6ZNB7 445 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 PNPLA1Q8N8W4 532 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 LPGAT1Q92604 370 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 PCDHAC1Q9H158 963 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms