RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 SUV39H1O43463 412 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 SOCS5O75159 536 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 RNF8O76064 485 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 PEX11BO96011 259 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 CPP00450 1065 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 CCDC172P0C7W6 258 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 FGF3P11487 239 aaPredicted RBP18.8■□□□□ 0.6
SRSF4-202ENST00000466448 SFTPCP11686 197 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 CR2P20023 1033 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 TNFAIP3P21580 790 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 POLD2P49005 469 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 HCAR3P49019 387 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 CDK3Q00526 305 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 CTBSQ01459 385 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 ZNF235Q14590 738 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 CLCA4Q14CN2 919 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 PTPRRQ15256 657 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 CLPPQ16740 277 aaPredicted RBP18.8■□□□□ 0.6
SRSF4-202ENST00000466448 RBM43Q6ZSC3 357 aaKnown RBP18.8■□□□□ 0.6
SRSF4-202ENST00000466448 NAGSQ8N159 534 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 PGBD5Q8N414 524 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 SLC17A4Q9Y2C5 497 aa18.8■□□□□ 0.6
SRSF4-202ENST00000466448 A0A1W2PQ67 120 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 ZW10O43264 779 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 LRCH4O75427 683 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 NKAIN2Q5VXU1 208 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 PPP1R2P3Q6NXS1 205 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 Q6ZVL8 140 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 PSTKQ8IV42 348 aaKnown RBP18.79■□□□□ 0.6
SRSF4-202ENST00000466448 LZTR1Q8N653 840 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 NKD1Q969G9 470 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 TAAR9Q96RI9 348 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 NUDCD1Q96RS6 583 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 HSD3B7Q9H2F3 369 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 NOD2Q9HC29 1040 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 LMBRD1Q9NUN5 540 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 KCTD5Q9NXV2 234 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 PCDHGA3Q9Y5H0 932 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 TLN1Q9Y490 2541 aaKnown RBP18.79■□□□□ 0.6
SRSF4-202ENST00000466448 BSNQ9UPA5 3926 aa18.79■□□□□ 0.6
SRSF4-202ENST00000466448 GOLGA6CA6NDK9 693 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 GOLGA6BA6NDN3 693 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 NPIPB15A6NHN6 443 aaPredicted RBP18.78■□□□□ 0.6
SRSF4-202ENST00000466448 PPM1DO15297 605 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 PPFIA2O75334 1257 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 GOLGA6DP0CG33 693 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 ADCY8P40145 1251 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 GPR3P46089 330 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 ZNF135P52742 658 aaPredicted RBP18.78■□□□□ 0.6
SRSF4-202ENST00000466448 LIMK2P53671 638 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 TRAF2Q12933 501 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 BIRC2Q13490 618 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 RAET1GQ6H3X3 334 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 TSPAN33Q86UF1 283 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 OR4D9Q8NGE8 314 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 FNIP1Q8TF40 1166 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 SLC12A9Q9BXP2 914 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 ZWILCHQ9H900 591 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 ETNK2Q9NVF9 386 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 GEMIN8Q9NWZ8 242 aaKnown RBP18.78■□□□□ 0.6
SRSF4-202ENST00000466448 GOLGA6AQ9NYA3 693 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 PHTF1Q9UMS5 762 aa18.78■□□□□ 0.6
SRSF4-202ENST00000466448 IGHV1OR21-1A0A087WYE8 117 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 PSMD11O00231 422 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 MAFKO60675 156 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 IVLP07476 585 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 CYP2A6P11509 494 aaPredicted RBP18.77■□□□□ 0.6
SRSF4-202ENST00000466448 ATP1A3P13637 1013 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 CDK11BP21127 795 aaKnown RBP18.77■□□□□ 0.6
SRSF4-202ENST00000466448 MPSTP25325 297 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 TEAD1P28347 426 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 CSF2RBP32927 897 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 HSPA9P38646 679 aaKnown RBP18.77■□□□□ 0.6
SRSF4-202ENST00000466448 ATP1A2P50993 1020 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 MAXP61244 160 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 TRA2AQ13595 282 aaKnown RBP eCLIP18.77■□□□□ 0.68e-11■■■■■ 41
SRSF4-202ENST00000466448 NCAPHQ15003 741 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 DOK6Q6PKX4 331 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 AGBL5Q8NDL9 886 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 ART4Q93070 314 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 SCRN2Q96FV2 425 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 MCCC1Q96RQ3 725 aaPredicted RBP18.77■□□□□ 0.6
SRSF4-202ENST00000466448 MGME1Q9BQP7 344 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 SLC25A18Q9H1K4 315 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 TMEM9Q9P0T7 183 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 PLEKHM1Q9Y4G2 1056 aa18.77■□□□□ 0.6
SRSF4-202ENST00000466448 A0A0U1RQS6 177 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 H3BRJ5 948 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 PGLSO95336 258 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 SOD1P00441 154 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 THRAP10827 490 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 AMPD1P23109 780 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 NFKBIAP25963 317 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 IL1R2P27930 398 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 UGT1A3P35503 534 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 ACTR1BP42025 376 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 ACTR1AP61163 376 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 SQSTM1Q13501 440 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 TMCO3Q6UWJ1 677 aa18.76■□□□□ 0.59
SRSF4-202ENST00000466448 TECPR1Q7Z6L1 1165 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms