RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ASCC3Q8N3C0 2202 aaKnown RBP11.64□□□□□ -0.55
CUX1-207ENST00000465461 TDRD6O60522 2096 aaKnown RBP11.64□□□□□ -0.55
CUX1-207ENST00000465461 SPTY2D1-AS1A0A0U1RR47 76 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 PSMD11O00231 422 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 ANXA9O76027 345 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 ADRA1AP35348 466 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 CCT8P50990 548 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 THOP1P52888 689 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 TERF1P54274 439 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 MTM1Q13496 603 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 PTPRCAPQ14761 206 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 SLC14A2Q15849 920 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 PARP6Q2NL67 630 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 ALS2CLQ60I27 953 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 RAET1GQ6H3X3 334 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 ESRP1Q6NXG1 681 aaKnown RBP11.64□□□□□ -0.55
CUX1-207ENST00000465461 MICALCLQ6ZW33 695 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 RD3Q7Z3Z2 195 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 TMC3Q7Z5M5 1100 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
CUX1-207ENST00000465461 BLOC1S5Q8TDH9 187 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 PTCD2Q8WV60 388 aaKnown RBP11.64□□□□□ -0.55
CUX1-207ENST00000465461 AP2M1Q96CW1 435 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 RIOK2Q9BVS4 552 aaKnown RBP11.64□□□□□ -0.55
CUX1-207ENST00000465461 GPR63Q9BZJ6 419 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 ERVMER34-1Q9H9K5 563 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 ZFYVE1Q9HBF4 777 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 ETNK1Q9HBU6 452 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 MAGEE1Q9HCI5 957 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 MRPL40Q9NQ50 206 aaKnown RBP11.64□□□□□ -0.55
CUX1-207ENST00000465461 SNX12Q9UMY4 172 aa11.64□□□□□ -0.55
CUX1-207ENST00000465461 TMEM202A6NGA9 273 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 INPP4BO15327 924 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 SOD1P00441 154 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 ITGAVP06756 1048 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 ZNF30P17039 623 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 TPH1P17752 444 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 EPHA8P29322 1005 aaPredicted RBP11.63□□□□□ -0.55
CUX1-207ENST00000465461 STIP1P31948 543 aaKnown RBP11.63□□□□□ -0.55
CUX1-207ENST00000465461 RPL22P35268 128 aaKnown RBP11.63□□□□□ -0.55
CUX1-207ENST00000465461 GPR1P46091 355 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 RXRGP48443 463 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 SPINT3P49223 89 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 ARRB1P49407 418 aaPredicted RBP11.63□□□□□ -0.55
CUX1-207ENST00000465461 YPEL5P62699 121 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 C1orf61Q13536 156 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 PUM1Q14671 1186 aaKnown RBP eCLIP11.63□□□□□ -0.55
CUX1-207ENST00000465461 NFATC4Q14934 902 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 TRIP13Q15645 432 aaPredicted RBP11.63□□□□□ -0.55
CUX1-207ENST00000465461 P3H1Q32P28 736 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 PSAPL1Q6NUJ1 521 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 TTC27Q6P3X3 843 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 GSTA5Q7RTV2 222 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 PIP4P1Q86T03 277 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 TRIM74Q86UV6 250 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 HEATR4Q86WZ0 1026 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 NAXDQ8IW45 347 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 SLC25A45Q8N413 288 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 EID2Q8N6I1 236 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 GPR26Q8NDV2 337 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 FAM174AQ8TBP5 190 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 CCHCR1Q8TD31 782 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 RHBDD1Q8TEB9 315 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 SAP25Q8TEE9 199 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 MAIP1Q8WWC4 291 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 RTP4Q96DX8 246 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 CAPZA3Q96KX2 299 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 TBL1YQ9BQ87 522 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 FRMD8P1Q9BZ68 369 aaPredicted RBP11.63□□□□□ -0.55
CUX1-207ENST00000465461 SUDS3Q9H7L9 328 aaPredicted RBP11.63□□□□□ -0.55
CUX1-207ENST00000465461 MOSPD1Q9UJG1 213 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 AAR2Q9Y312 384 aaKnown RBP11.63□□□□□ -0.55
CUX1-207ENST00000465461 KCTD3Q9Y597 815 aa11.63□□□□□ -0.55
CUX1-207ENST00000465461 CFAP54Q96N23 3096 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 SPAARA0A1B0GVQ0 90 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 FADS2P1A8MWK0 482 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 FFAR2O15552 330 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 PIAS2O75928 621 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 KCNK5O95279 499 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 EPOP01588 193 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 CSF2P04141 144 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 CELA2BP08218 269 aaPredicted RBP11.62□□□□□ -0.55
CUX1-207ENST00000465461 ZNF883P0CG24 379 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 MYF5P13349 255 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 BPIP17213 487 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 JUNDP17535 347 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 HLA-DPA1P20036 260 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 SDHBP21912 280 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 DGKAP23743 735 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 MSNP26038 577 aaKnown RBP11.62□□□□□ -0.55
CUX1-207ENST00000465461 TRIM23P36406 574 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 GRIA1P42261 906 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 TNNT3P45378 269 aaPredicted RBP11.62□□□□□ -0.55
CUX1-207ENST00000465461 POLD2P49005 469 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 NOVA1P51513 510 aaKnown RBP11.62□□□□□ -0.55
CUX1-207ENST00000465461 CDK3Q00526 305 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 SLC14A1Q13336 389 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 PTK2BQ14289 1009 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 ALG11Q2TAA5 492 aa11.62□□□□□ -0.55
CUX1-207ENST00000465461 PPM1JQ5JR12 505 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms