RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 CUL4AQ13619 759 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 PDE1CQ14123 709 aaPredicted RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 NEDD9Q14511 834 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 CRYMQ14894 314 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 MMEL1Q495T6 779 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 FSCBQ5H9T9 825 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 RARS2Q5T160 578 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 GKAP1Q5VSY0 366 aaPredicted RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 AWAT2Q6E213 333 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 METTL2BQ6P1Q9 378 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 CLEC17AQ6ZS10 378 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 Q6ZTK2 550 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 DPPA4Q7L190 304 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SHFQ7M4L6 423 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SZRD1Q7Z422 152 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 NRROSQ86YC3 692 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 TICAM1Q8IUC6 712 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 PDILTQ8N807 584 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 C9orf106Q8NAJ2 232 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 HJURPQ8NCD3 748 aaPredicted RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 OR14L1PQ8NHC6 308 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 B4GALNT2Q8NHY0 566 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 TRPC4APQ8TEL6 797 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 WFIKKN2Q8TEU8 576 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SCARB1Q8WTV0 552 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SNRNP27Q8WVK2 155 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SMG7Q92540 1137 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 LRRC59Q96AG4 307 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 RRNAD1Q96FB5 475 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 METTL2AQ96IZ6 378 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 EGLN2Q96KS0 407 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 TIGD1Q96MW7 591 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 TMEM47Q9BQJ4 181 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SDF4Q9BRK5 362 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 SLC25A33Q9BSK2 321 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 HAUS8Q9BT25 410 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 IFIH1Q9BYX4 1025 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 FAM234AQ9H0X4 552 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 CCDC68Q9H2F9 335 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 MAGIXQ9H6Y5 334 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 KAT14Q9H8E8 782 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 MTMR10Q9NXD2 777 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 WSB2Q9NYS7 404 aaPredicted RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 CISD1Q9NZ45 108 aaKnown RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 UBA2Q9UBT2 640 aaPredicted RBP1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 FBXL17Q9UF56 701 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 VPS28Q9UK41 221 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 ERVK-11Q9UQG0 969 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 MTMR6Q9Y217 621 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 PTGDR2Q9Y5Y4 395 aa1.94□□□□□ -2.1
NUCKS1-202ENST00000464938 IGLV5-52A0A0A0MRZ9 124 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 hCG_1807616A0A1W2PRN6 198 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 GOLGA6L9A6NEM1 432 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 SRRM3A6NNA2 597 aaPredicted RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 KDM4EB2RXH2 506 aaPredicted RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 ITM2AO43736 263 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 AHCYL1O43865 530 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 ZIC3O60481 467 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 NDUFS7O75251 213 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 GJB3O75712 270 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 ADRB2P07550 413 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 CSH1P0DML2 217 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 CSH2P0DML3 217 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 NR2F1P10589 423 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 IL7RP16871 459 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 ZNF12P17014 697 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 MCM3P25205 808 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 PPARGP37231 505 aaPredicted RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 ENTPD1P49961 510 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 TAS2R40P59535 323 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 MRPS34P82930 218 aaKnown RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 SORDQ00796 357 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 ECT2LQ008S8 904 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 MC1RQ01726 317 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 CRYZQ08257 329 aaKnown RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 DSC1Q08554 894 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 SPOCK1Q08629 439 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 GOLGA8DPQ0D2H9 430 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 NFATC4Q14934 902 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 PCLAFQ15004 111 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 DECR1Q16698 335 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 EIF2S3LQ2VIR3 472 aaKnown RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 AMZ1Q400G9 498 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 SETMARQ53H47 684 aaPredicted RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 LRIF1Q5T3J3 769 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 GGNBP1Q5YKI7 109 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 SIGIRRQ6IA17 410 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 KIAA0930Q6ICG6 404 aaPredicted RBP1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 TMEM154Q6P9G4 183 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 B3GNT6Q6ZMB0 384 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 MCEMP1Q8IX19 187 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 BEST3Q8N1M1 668 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 MAGEC3Q8TD91 643 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 FAM216AQ8WUB2 273 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 ASB5Q8WWX0 329 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 OIT3Q8WWZ8 545 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 RHBDF1Q96CC6 855 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 PHF21BQ96EK2 531 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 CCDC34Q96HJ3 373 aa1.93□□□□□ -2.1
NUCKS1-202ENST00000464938 MMTAG2Q9BU76 263 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms