RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CDH2P19022 906 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-205ENST00000464541 MAN1A1P33908 653 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 EIF2S3P41091 472 aaKnown RBP5.94□□□□□ -1.46
PTCD3-205ENST00000464541 FASLGP48023 281 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 CLCNKAP51800 687 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 POU3F1Q03052 451 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-205ENST00000464541 GOLGA8DPQ0D2H9 430 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 ZNF155Q12901 538 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-205ENST00000464541 TBCEQ15813 527 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-205ENST00000464541 FAAH2Q6GMR7 532 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 CPLX4Q7Z7G2 160 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 CHERPQ8IWX8 916 aaKnown RBP5.94□□□□□ -1.46
PTCD3-205ENST00000464541 TMEM116Q8NCL8 245 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 LMO3Q8TAP4 145 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 SGCDQ92629 289 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 TANKQ92844 425 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 KCNN2Q9H2S1 579 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 SCPEP1Q9HB40 452 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 MMP25Q9NPA2 562 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 NOX4Q9NPH5 578 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 LIMA1Q9UHB6 759 aaKnown RBP5.94□□□□□ -1.46
PTCD3-205ENST00000464541 TINAGQ9UJW2 476 aa5.94□□□□□ -1.46
PTCD3-205ENST00000464541 A0A1B0GUV1 79 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 SMTNL1A8MU46 457 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 PRSS44E7EML9 344 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 IPO7O95373 1038 aaKnown RBP5.93□□□□□ -1.46
PTCD3-205ENST00000464541 CLDN14O95500 239 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 DDX58O95786 925 aaKnown RBP5.93□□□□□ -1.46
PTCD3-205ENST00000464541 CD4P01730 458 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 SNRNP70P08621 437 aaKnown RBP5.93□□□□□ -1.46
PTCD3-205ENST00000464541 LINC00271P0C7V0 271 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 G6PDP11413 515 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 KRT10P13645 584 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 HOXC9P31274 260 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 HNRNPH2P55795 449 aaKnown RBP5.93□□□□□ -1.46
PTCD3-205ENST00000464541 RRP1P56182 461 aaKnown RBP5.93□□□□□ -1.46
PTCD3-205ENST00000464541 COASYQ13057 564 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 CXorf66Q5JRM2 361 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-205ENST00000464541 SIGIRRQ6IA17 410 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 FOXRED2Q8IWF2 684 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 HDAC2Q92769 488 aaKnown RBP5.93□□□□□ -1.46
PTCD3-205ENST00000464541 MMABQ96EY8 250 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-205ENST00000464541 C3orf30Q96M34 536 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 C1QTNF5Q9BXJ0 243 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 LTB4R2Q9NPC1 389 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 OLA1Q9NTK5 396 aaKnown RBP5.93□□□□□ -1.46
PTCD3-205ENST00000464541 C1RLQ9NZP8 487 aa5.93□□□□□ -1.46
PTCD3-205ENST00000464541 SNAP23O00161 211 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 KDM4BO94953 1096 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 RGS2P41220 211 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 RPS3AP61247 264 aaKnown RBP5.92□□□□□ -1.46
PTCD3-205ENST00000464541 ZBED6P86452 979 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 FRG1Q14331 258 aaKnown RBP5.92□□□□□ -1.46
PTCD3-205ENST00000464541 EIF2S3LQ2VIR3 472 aaKnown RBP5.92□□□□□ -1.46
PTCD3-205ENST00000464541 FRG2Q64ET8 278 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 WDR73Q6P4I2 378 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 SLC36A4Q6YBV0 504 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.92□□□□□ -1.46
PTCD3-205ENST00000464541 BHLHA9Q7RTU4 235 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 HAPLN4Q86UW8 402 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 DCP1BQ8IZD4 617 aaKnown RBP5.92□□□□□ -1.46
PTCD3-205ENST00000464541 ADSSL1Q8N142 457 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 EVI5LQ96CN4 794 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 SPRY4Q9C004 299 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 DIAPH3Q9NSV4 1193 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 EHD2Q9NZN4 543 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 ORC3Q9UBD5 711 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-205ENST00000464541 KCNE2Q9Y6J6 123 aa5.92□□□□□ -1.46
PTCD3-205ENST00000464541 A0A1W2PQF6 199 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 SCGB1D1O95968 90 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 CSNK2A1P68400 391 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-205ENST00000464541 RPL36AP83881 106 aaKnown RBP5.91□□□□□ -1.46
PTCD3-205ENST00000464541 NIPAL4Q0D2K0 466 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 SOWAHCQ53LP3 525 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-205ENST00000464541 DPPA4Q7L190 304 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 CSNK2A3Q8NEV1 391 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 UCMAQ8WVF2 138 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 ARHGEF26Q96DR7 871 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 CSF3RQ99062 836 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 ZHX3Q9H4I2 956 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 EBF2Q9HAK2 575 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 UBA2Q9UBT2 640 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-205ENST00000464541 AASSQ9UDR5 926 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 VDAC3Q9Y277 283 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 MAU2Q9Y6X3 613 aa5.91□□□□□ -1.46
PTCD3-205ENST00000464541 MID1O15344 667 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 SLC25A12O75746 678 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 LAMP2P13473 410 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 CD53P19397 219 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 BDKRB2P30411 391 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 GRIK2Q13002 908 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 ADIPOQQ15848 244 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 PAPPA-AS1Q5QFB9 102 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 HIST2H2BCQ6DN03 193 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 HIST2H2BDQ6DRA6 164 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 NCEH1Q6PIU2 408 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 RSRC2Q7L4I2 434 aaKnown RBP5.9□□□□□ -1.46
PTCD3-205ENST00000464541 ARHGAP12Q8IWW6 846 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 RBMXL3Q8N7X1 1067 aaKnown RBP5.9□□□□□ -1.46
PTCD3-205ENST00000464541 FRMD1Q8N878 549 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms